Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC007394.1-201ENST00000421941 531 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC093655.2-201ENST00000425735 631 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 C8orf59P1-201ENST00000429930 303 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 NMNAT1P2-201ENST00000435192 860 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 FHP1-201ENST00000442741 703 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 RAB11AP1-201ENST00000442978 646 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 CDC27P1-201ENST00000445384 715 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 SNRPGP9-201ENST00000456025 225 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 CFTRP1-201ENST00000456646 183 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 RNU6-1218P-201ENST00000458990 108 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC079841.1-201ENST00000481228 950 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC109458.1-201ENST00000508858 316 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 snoU109.6-201ENST00000516831 118 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC012400.1-201ENST00000518452 381 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AL139174.1-201ENST00000531489 886 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 TRAV15-201ENST00000556680 249 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC093519.1-201ENST00000566109 298 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC074051.3-201ENST00000570238 358 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC090181.2-201ENST00000602975 672 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC023813.4-201ENST00000607580 580 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC106028.5-201ENST00000610332 395 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 uc_338.18-201ENST00000615451 175 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 LINC00901.1-201ENST00000617252 152 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 MIR6730-201ENST00000622213 67 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC015804.1-201ENST00000622935 435 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AL450345.1-202ENST00000605741 3881 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX18Q96RF0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX18Q96RF0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX18Q96RF0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX18Q96RF0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 RN7SKP104-201ENST00000362605 328 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 U3.3-201ENST00000362986 216 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 RNU6-374P-201ENST00000364146 108 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 SNORA58B-201ENST00000364259 136 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 RNU6-660P-201ENST00000364566 109 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 RNA5SP90-201ENST00000364801 99 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 AL390316.1-201ENST00000406279 553 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 OR4K12P-201ENST00000406538 961 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 ELOCP17-201ENST00000414751 326 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 SLC35E1P1-201ENST00000419313 864 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 CYCSP46-201ENST00000423569 204 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 AL139148.1-201ENST00000427122 680 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 FABP7P2-201ENST00000429946 379 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 ACTR3P2-201ENST00000439585 1257 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 USP9YP29-201ENST00000445112 563 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 NDUFA5P7-201ENST00000452914 242 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 AC116337.2-201ENST00000477662 156 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 RPL7P16-201ENST00000479738 738 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 RN7SL441P-201ENST00000492388 296 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 AC073073.1-201ENST00000493920 463 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 AC008953.1-201ENST00000497334 318 ntBASIC4.64□□□□□ -1.67
SNX18Q96RF0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX18Q96RF0 AC010460.1-201ENST00000507087 466 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms