Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 PSMD10P3-201ENST00000437000 448 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC021678.1-201ENST00000505195 936 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC013828.2-201ENST00000532487 235 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC141257.3-201ENST00000572906 215 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 NRBF2P5-201ENST00000603087 788 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC135507.2-201ENST00000612443 309 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 OR9K1P-202ENST00000641111 3217 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 GDI2P1-201ENST00000429312 1336 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 RNU6-462P-201ENST00000362659 105 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 SNORD56.2-201ENST00000363242 71 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 RNU6-1085P-201ENST00000363576 107 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 U3.10-201ENST00000364459 214 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 RNU6-619P-201ENST00000365146 108 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 CBX1P3-201ENST00000413296 527 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AC017078.1-201ENST00000416146 368 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 TMBIM7P-201ENST00000418074 855 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AL034379.1-201ENST00000423216 253 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 NPM1P34-201ENST00000428821 893 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AL596266.1-201ENST00000448132 400 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 RAD23BP3-201ENST00000454157 1152 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AL389915.2-201ENST00000454576 441 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AC099563.1-201ENST00000456086 418 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 RN7SL738P-201ENST00000470264 297 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 SNRPCP2-201ENST00000504370 475 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 RNU6-1261P-201ENST00000517194 104 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 RAB9BP1-201ENST00000519581 626 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 HMGB1P40-201ENST00000525121 540 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AP001922.4-201ENST00000526967 290 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AC022878.1-201ENST00000530684 149 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AL031658.2-201ENST00000616850 651 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 AC232271.1-201ENST00000602455 2715 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 SAMMSON-210ENST00000641260 1308 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 RNA5SP305-201ENST00000362665 119 ntBASIC6.25□□□□□ -1.41
SYNGAP1Q96PV0 Y_RNA.142-201ENST00000363491 102 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms