Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 EXOC5P1-201ENST00000510543 1969 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 BDP1P-201ENST00000582658 1990 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 LINC02471-203ENST00000641941 4752 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC024560.2-201ENST00000507981 1497 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 HLFP1-201ENST00000402375 499 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AL139247.1-201ENST00000422768 325 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 RNF19BPX-201ENST00000426224 625 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 NPM1P34-201ENST00000428821 893 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AL445584.1-201ENST00000431451 330 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 MTCO1P57-201ENST00000432182 261 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 MTCO1P52-201ENST00000433928 531 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC007389.2-201ENST00000434630 306 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 CDC27P1-201ENST00000445384 715 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC022695.1-201ENST00000522089 237 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC007991.1-201ENST00000522680 631 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 MTCO1P49-201ENST00000523429 802 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC034105.4-201ENST00000568304 277 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC073111.2-201ENST00000605657 1075 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AL354760.1-201ENST00000608357 643 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 AC009032.1-201ENST00000617574 431 ntBASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ECHDC3Q96DC8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AC018555.1-201ENST00000567548 1980 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 SOD2P1-201ENST00000396543 562 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AL500522.2-201ENST00000448562 343 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 HMGB3P22-202ENST00000451823 572 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 RN7SL542P-201ENST00000467147 294 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AC012170.1-201ENST00000495139 359 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 SNORA70.14-201ENST00000516205 110 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AC244505.7-201ENST00000599675 272 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AL049634.3-201ENST00000604968 457 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AC055764.2-201ENST00000610089 670 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 MIR7973-1-201ENST00000614683 76 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AL161637.1-201ENST00000622380 412 ntBASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ECHDC3Q96DC8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC017007.4-201ENST00000503353 1352 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AL627171.1-201ENST00000618845 1308 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 RNU6-185P-201ENST00000384421 107 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 MTND2P15-201ENST00000418575 892 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AL445528.1-201ENST00000426330 420 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AL353093.1-201ENST00000441292 436 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 SETD6P1-201ENST00000444575 317 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 HMGB1P26-201ENST00000452520 628 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC098824.1-201ENST00000453565 980 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms