Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AP000620.1-201ENST00000527147 504 ntBASIC6.86□□□□□ -1.31
HLA-CQ95604 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-CQ95604 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-CQ95604 AP003115.1-201ENST00000569849 463 ntBASIC6.86□□□□□ -1.31
HLA-CQ95604 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.86□□□□□ -1.31
HLA-CQ95604 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.86□□□□□ -1.31
HLA-CQ95604 AC098479.1-201ENST00000609225 154 ntBASIC6.86□□□□□ -1.31
HLA-CQ95604 AL352984.2-201ENST00000611153 546 ntBASIC6.86□□□□□ -1.31
HLA-CQ95604 AL021879.1-201ENST00000611756 288 ntBASIC6.86□□□□□ -1.31
HLA-CQ95604 AL355365.1-201ENST00000616480 294 ntBASIC6.86□□□□□ -1.31
HLA-CQ95604 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-CQ95604 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
HLA-CQ95604 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-CQ95604 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-CQ95604 AC083806.2-201ENST00000617795 2685 ntBASIC6.86□□□□□ -1.31
HLA-CQ95604 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.86□□□□□ -1.31
HLA-CQ95604 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-CQ95604 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-CQ95604 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.86□□□□□ -1.31
HLA-CQ95604 BDP1P-201ENST00000582658 1990 ntBASIC6.86□□□□□ -1.31
HLA-CQ95604 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.86□□□□□ -1.31
HLA-CQ95604 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-CQ95604 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.85□□□□□ -1.31
HLA-CQ95604 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
HLA-CQ95604 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HLA-CQ95604 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 AC130650.2-201ENST00000618736 2403 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 RNA5SP477-201ENST00000362639 119 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 SNORA74A-201ENST00000364089 198 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 SNORA58B-201ENST00000364259 136 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 MIR143-201ENST00000385300 106 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HLA-CQ95604 MIR548M-201ENST00000408260 86 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-CQ95604 AL359092.1-201ENST00000417156 265 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-CQ95604 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-CQ95604 ARL5AP4-201ENST00000430731 512 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-CQ95604 AL163193.1-201ENST00000444895 788 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-CQ95604 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.85□□□□□ -1.31
HLA-CQ95604 AC012400.1-201ENST00000518452 381 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-CQ95604 AC022616.4-201ENST00000522985 181 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 AP003396.4-201ENST00000527574 265 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.85□□□□□ -1.31
HLA-CQ95604 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.85□□□□□ -1.31
HLA-CQ95604 MIR5583-1-201ENST00000580941 59 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 AL359704.2-201ENST00000604335 521 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 MIR8062-201ENST00000621515 85 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 AC000123.2-201ENST00000623124 461 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 AC025034.2-201ENST00000623264 286 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 RAD17P2-201ENST00000451754 1977 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.85□□□□□ -1.31
HLA-CQ95604 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HLA-CQ95604 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HLA-CQ95604 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-CQ95604 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HLA-CQ95604 AC020658.2-201ENST00000559030 4020 ntBASIC6.85□□□□□ -1.31
HLA-CQ95604 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.85□□□□□ -1.31
HLA-CQ95604 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
HLA-CQ95604 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
HLA-CQ95604 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 HSPD1P8-201ENST00000400121 1658 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 AC145138.1-201ENST00000512908 2851 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 CDC27P2-201ENST00000425026 1922 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 TPTE2P4-201ENST00000258589 1605 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 SAMMSON-210ENST00000641260 1308 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.84□□□□□ -1.31
HLA-CQ95604 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HLA-CQ95604 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-CQ95604 RNU1-35P-201ENST00000362782 153 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 RNU6-26P-201ENST00000383985 107 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 MIR450B-201ENST00000401182 78 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 AL136372.1-201ENST00000403060 228 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 AL391361.1-201ENST00000405580 489 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-CQ95604 PGBD4P6-201ENST00000421501 610 ntBASIC6.84□□□□□ -1.31
HLA-CQ95604 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms