Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX1Q92499 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
DDX1Q92499 RNA5SP183-201ENST00000362452 119 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 U8.4-201ENST00000363626 134 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 RNU1-146P-201ENST00000364015 165 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 RNU4-91P-201ENST00000364778 135 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX1Q92499 RNU6-444P-201ENST00000383988 108 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 RNU6-116P-201ENST00000384042 109 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 MIR506-201ENST00000384998 124 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
DDX1Q92499 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
DDX1Q92499 EI24P3-201ENST00000399046 1062 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 AL133388.1-201ENST00000404509 287 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.72□□□□□ -1.49
DDX1Q92499 LINC00993-201ENST00000420453 540 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.72□□□□□ -1.49
DDX1Q92499 AC004448.2-201ENST00000422360 586 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DDX1Q92499 GSTM5P1-201ENST00000434751 660 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 RPS11P7-201ENST00000442125 465 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 CEACAMP9-201ENST00000442990 513 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX1Q92499 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX1Q92499 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX1Q92499 SNRPGP9-201ENST00000456025 225 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 AC112206.1-201ENST00000468416 477 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX1Q92499 MTCO2P30-201ENST00000503662 364 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX1Q92499 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX1Q92499 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.72□□□□□ -1.49
DDX1Q92499 AC027369.5-201ENST00000533838 755 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX1Q92499 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX1Q92499 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
DDX1Q92499 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX1Q92499 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
DDX1Q92499 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.72□□□□□ -1.49
DDX1Q92499 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX1Q92499 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX1Q92499 AC090616.5-202ENST00000582111 297 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX1Q92499 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX1Q92499 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX1Q92499 AC064836.2-201ENST00000609491 462 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 AC090970.3-201ENST00000612566 866 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 AC063943.3-201ENST00000615562 356 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX1Q92499 DNM1P47-203ENST00000571780 12667 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX1Q92499 AC093671.1-201ENST00000624981 2929 ntBASIC5.72□□□□□ -1.49
DDX1Q92499 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
DDX1Q92499 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX1Q92499 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX1Q92499 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
DDX1Q92499 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX1Q92499 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX1Q92499 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DDX1Q92499 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.72□□□□□ -1.49
DDX1Q92499 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
DDX1Q92499 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
DDX1Q92499 AL118496.1-201ENST00000440201 1812 ntBASIC5.71□□□□□ -1.49
DDX1Q92499 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.71□□□□□ -1.49
DDX1Q92499 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
DDX1Q92499 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
DDX1Q92499 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
DDX1Q92499 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
DDX1Q92499 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
DDX1Q92499 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
DDX1Q92499 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
DDX1Q92499 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.71□□□□□ -1.49
DDX1Q92499 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
DDX1Q92499 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX1Q92499 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX1Q92499 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.71□□□□□ -1.5
DDX1Q92499 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX1Q92499 ELF2P3-201ENST00000445099 1506 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DDX1Q92499 MIR133A2-201ENST00000347538 102 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 Y_RNA.256-201ENST00000364594 104 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 CYCSP45-201ENST00000402289 315 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 AL590002.1-201ENST00000406554 418 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX1Q92499 AC005033.1-201ENST00000428904 813 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX1Q92499 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.71□□□□□ -1.5
DDX1Q92499 RPL5P25-201ENST00000441148 775 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 TCEA1P3-201ENST00000443005 880 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX1Q92499 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX1Q92499 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DDX1Q92499 RNA5SP269-201ENST00000459032 137 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.71□□□□□ -1.5
DDX1Q92499 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX1Q92499 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
DDX1Q92499 RNY4P37-201ENST00000516225 96 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 SCARNA16.4-201ENST00000516956 187 ntBASIC5.71□□□□□ -1.5
DDX1Q92499 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX1Q92499 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms