Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC9.88□□□□□ -0.83
TRIM41Q8WV44 AC100830.2-201ENST00000581636 240 ntBASIC9.88□□□□□ -0.83
TRIM41Q8WV44 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC9.88□□□□□ -0.83
TRIM41Q8WV44 AC004853.1-201ENST00000604902 698 ntBASIC9.88□□□□□ -0.83
TRIM41Q8WV44 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC9.88□□□□□ -0.83
TRIM41Q8WV44 AC093913.1-201ENST00000614178 329 ntBASIC9.88□□□□□ -0.83
TRIM41Q8WV44 TTK-211ENST00000627129 240 ntTSL 5 BASIC9.88□□□□□ -0.83
TRIM41Q8WV44 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM41Q8WV44 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM41Q8WV44 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM41Q8WV44 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM41Q8WV44 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM41Q8WV44 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM41Q8WV44 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 RNU6-474P-201ENST00000384243 107 ntBASIC9.87□□□□□ -0.83
TRIM41Q8WV44 RNU6-196P-201ENST00000384315 107 ntBASIC9.87□□□□□ -0.83
TRIM41Q8WV44 Y_RNA.579-201ENST00000390939 94 ntBASIC9.87□□□□□ -0.83
TRIM41Q8WV44 RPL7P58-201ENST00000402913 758 ntBASIC9.87□□□□□ -0.83
TRIM41Q8WV44 NAP1L1P2-201ENST00000414182 1089 ntBASIC9.87□□□□□ -0.83
TRIM41Q8WV44 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 FTH1P8-201ENST00000498161 514 ntBASIC9.87□□□□□ -0.83
TRIM41Q8WV44 RNU6-583P-201ENST00000516012 92 ntBASIC9.87□□□□□ -0.83
TRIM41Q8WV44 MIR2117-201ENST00000516780 80 ntBASIC9.87□□□□□ -0.83
TRIM41Q8WV44 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 RGS4-207ENST00000527809 817 ntTSL 4 BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 CKS1BP3-201ENST00000600888 237 ntBASIC9.87□□□□□ -0.83
TRIM41Q8WV44 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 AC119674.1-207ENST00000641355 633 ntBASIC9.87□□□□□ -0.83
TRIM41Q8WV44 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
TRIM41Q8WV44 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 RN7SKP113-201ENST00000363891 295 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 RNVU1-6-201ENST00000364688 164 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 SNORA33.2-201ENST00000365413 134 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 NFIB-202ENST00000380924 840 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 RNA5SP91-201ENST00000390902 119 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 RPA3-203ENST00000401447 414 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 RPS4XP9-201ENST00000405151 780 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 VN1R8P-201ENST00000407739 893 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC009310.1-201ENST00000414414 451 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 TEX41-204ENST00000423031 491 ntTSL 4 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 CBX1P1-201ENST00000440184 427 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC023141.8-201ENST00000442554 208 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 MTCO1P42-201ENST00000457379 726 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 RN7SL354P-201ENST00000469282 294 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC006390.1-201ENST00000508068 283 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 FAM106CP-201ENST00000582212 507 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 MIR544B-201ENST00000582372 78 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AL359999.1-201ENST00000604513 294 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AC009248.2-201ENST00000619826 254 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AP006248.2-201ENST00000623309 592 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 SRP54-214ENST00000630962 162 ntTSL 5 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 CASC19-260ENST00000641828 2001 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 HSPD1P8-201ENST00000400121 1658 ntBASIC9.86□□□□□ -0.83
TRIM41Q8WV44 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
TRIM41Q8WV44 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC9.85□□□□□ -0.83
TRIM41Q8WV44 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TRIM41Q8WV44 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TRIM41Q8WV44 AC007114.2-201ENST00000576014 4281 ntBASIC9.85□□□□□ -0.83
TRIM41Q8WV44 RNU6-1318P-201ENST00000365389 103 ntBASIC9.85□□□□□ -0.83
TRIM41Q8WV44 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TRIM41Q8WV44 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TRIM41Q8WV44 NPM1P18-201ENST00000434232 732 ntBASIC9.85□□□□□ -0.83
TRIM41Q8WV44 LSM1P1-201ENST00000438629 273 ntBASIC9.85□□□□□ -0.83
TRIM41Q8WV44 RPL7P59-201ENST00000447700 943 ntBASIC9.85□□□□□ -0.83
TRIM41Q8WV44 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC9.85□□□□□ -0.83
TRIM41Q8WV44 SLC25A51P1-201ENST00000468432 871 ntBASIC9.85□□□□□ -0.83
TRIM41Q8WV44 RPL7AP10-201ENST00000481016 791 ntBASIC9.85□□□□□ -0.83
TRIM41Q8WV44 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC9.85□□□□□ -0.83
TRIM41Q8WV44 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC9.85□□□□□ -0.83
TRIM41Q8WV44 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
TRIM41Q8WV44 RNU6-1334P-201ENST00000516032 105 ntBASIC9.85□□□□□ -0.83
TRIM41Q8WV44 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms