Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AL050321.1-201ENST00000432363 400 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AL627308.1-201ENST00000435693 821 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 HMGB1P45-201ENST00000435986 653 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC004980.3-201ENST00000447046 365 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC073850.1-201ENST00000449243 255 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 FDX1P2-201ENST00000450769 375 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 UBDP1-202ENST00000457888 382 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 RPS17P2-201ENST00000461663 408 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 VPS26AP1-201ENST00000483197 979 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC109462.1-201ENST00000491087 368 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AL358832.1-201ENST00000497800 389 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC008638.1-201ENST00000506035 866 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 OR5M14P-201ENST00000506803 618 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC104108.1-201ENST00000509930 412 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC022483.1-201ENST00000514020 567 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 RNU6-513P-201ENST00000516104 104 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 RN7SKP31-201ENST00000516354 278 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 SNORA20.3-201ENST00000516880 132 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 CR383656.6-201ENST00000550518 394 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC127024.5-201ENST00000580085 462 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 MEMO1P5-201ENST00000604810 406 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AP000860.1-201ENST00000605250 559 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC104458.1-201ENST00000608243 463 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AL121757.2-201ENST00000611223 313 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC104260.1-201ENST00000616660 539 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AP005264.7-201ENST00000625003 745 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC011447.7-201ENST00000624228 1590 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AC011755.1-201ENST00000623763 2049 ntBASIC4.9□□□□□ -1.62
VRK3Q8IV63 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.9□□□□□ -1.62
VRK3Q8IV63 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
VRK3Q8IV63 AC112255.1-201ENST00000624070 2493 ntBASIC4.9□□□□□ -1.62
VRK3Q8IV63 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VRK3Q8IV63 AC012078.1-201ENST00000405035 1646 ntBASIC4.9□□□□□ -1.62
VRK3Q8IV63 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
VRK3Q8IV63 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
VRK3Q8IV63 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VRK3Q8IV63 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.9□□□□□ -1.62
VRK3Q8IV63 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VRK3Q8IV63 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.9□□□□□ -1.62
VRK3Q8IV63 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VRK3Q8IV63 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
VRK3Q8IV63 RNU6-660P-201ENST00000364566 109 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 NACAP7-201ENST00000407371 609 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 RN7SKP213-201ENST00000410746 298 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 RPL23AP27-201ENST00000415161 451 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC093162.1-201ENST00000419682 124 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC012498.1-201ENST00000424037 437 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 PSMD10P3-201ENST00000437000 448 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 MTATP6P30-201ENST00000443540 664 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 RPL30P9-201ENST00000465586 330 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC146507.1-201ENST00000468335 354 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 CDH12P2-201ENST00000504393 298 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 ENPP7P11-201ENST00000505915 627 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 MRPS33P2-201ENST00000507850 322 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 BTG4P1-201ENST00000510421 183 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC091133.4-201ENST00000511142 308 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC046134.1-201ENST00000514454 666 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 RNU6-507P-201ENST00000516045 100 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 RNU6-314P-201ENST00000516574 104 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC125612.1-201ENST00000547580 377 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 HMGN2P6-201ENST00000551091 273 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms