Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LTBQ06643 ENSAP3-201ENST00000312710 333 ntBASIC4.33□□□□□ -1.72
LTBQ06643 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LTBQ06643 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LTBQ06643 U3.30-201ENST00000391308 210 ntBASIC4.33□□□□□ -1.72
LTBQ06643 AC093719.1-202ENST00000392735 373 ntBASIC4.33□□□□□ -1.72
LTBQ06643 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.33□□□□□ -1.72
LTBQ06643 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.33□□□□□ -1.72
LTBQ06643 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LTBQ06643 OR5AW1P-201ENST00000426334 1006 ntBASIC4.33□□□□□ -1.72
LTBQ06643 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 RPS17P8-201ENST00000434525 335 ntBASIC4.33□□□□□ -1.72
LTBQ06643 MTCYBP39-201ENST00000437562 491 ntBASIC4.33□□□□□ -1.72
LTBQ06643 RPL23AP76-201ENST00000441860 458 ntBASIC4.33□□□□□ -1.72
LTBQ06643 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.33□□□□□ -1.72
LTBQ06643 AP000936.2-201ENST00000447151 681 ntBASIC4.33□□□□□ -1.72
LTBQ06643 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.33□□□□□ -1.72
LTBQ06643 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.33□□□□□ -1.72
LTBQ06643 AC034236.1-201ENST00000469891 373 ntBASIC4.33□□□□□ -1.72
LTBQ06643 AC037198.2-201ENST00000478845 733 ntBASIC4.33□□□□□ -1.72
LTBQ06643 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.33□□□□□ -1.72
LTBQ06643 GAPDHP56-201ENST00000506031 988 ntBASIC4.33□□□□□ -1.72
LTBQ06643 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.33□□□□□ -1.72
LTBQ06643 AC116353.3-201ENST00000511215 249 ntBASIC4.33□□□□□ -1.72
LTBQ06643 AC093755.1-201ENST00000512950 1023 ntBASIC4.33□□□□□ -1.72
LTBQ06643 AC008837.2-201ENST00000513076 418 ntBASIC4.33□□□□□ -1.72
LTBQ06643 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.33□□□□□ -1.72
LTBQ06643 RNA5SP464-201ENST00000516251 108 ntBASIC4.33□□□□□ -1.72
LTBQ06643 IGHV3-63-201ENST00000518422 341 ntBASIC4.33□□□□□ -1.72
LTBQ06643 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.33□□□□□ -1.72
LTBQ06643 AC044913.1-201ENST00000557200 430 ntBASIC4.33□□□□□ -1.72
LTBQ06643 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.33□□□□□ -1.72
LTBQ06643 AGGF1P4-201ENST00000568249 801 ntBASIC4.33□□□□□ -1.72
LTBQ06643 MIR3160-1-201ENST00000577972 85 ntBASIC4.33□□□□□ -1.72
LTBQ06643 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.33□□□□□ -1.72
LTBQ06643 AC022726.1-201ENST00000587475 207 ntBASIC4.33□□□□□ -1.72
LTBQ06643 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LTBQ06643 MLECP1-201ENST00000615893 709 ntBASIC4.33□□□□□ -1.72
LTBQ06643 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.33□□□□□ -1.72
LTBQ06643 AC008785.1-201ENST00000624475 456 ntBASIC4.33□□□□□ -1.72
LTBQ06643 CR381572.2-201ENST00000624852 397 ntBASIC4.33□□□□□ -1.72
LTBQ06643 FP325313.1-201ENST00000638228 703 ntBASIC4.33□□□□□ -1.72
LTBQ06643 MFSD8-245ENST00000641743 948 ntBASIC4.33□□□□□ -1.72
LTBQ06643 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.33□□□□□ -1.72
LTBQ06643 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 A2MP1-204ENST00000566278 4130 ntBASIC4.33□□□□□ -1.72
LTBQ06643 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LTBQ06643 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 KARSP3-201ENST00000571212 1504 ntBASIC4.32□□□□□ -1.72
LTBQ06643 SAMMSON-213ENST00000641336 1521 ntBASIC4.32□□□□□ -1.72
LTBQ06643 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LTBQ06643 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LTBQ06643 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LTBQ06643 OR56B2P-201ENST00000317102 954 ntBASIC4.32□□□□□ -1.72
LTBQ06643 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LTBQ06643 AL359837.1-201ENST00000381357 287 ntBASIC4.32□□□□□ -1.72
LTBQ06643 Y_RNA.560-201ENST00000384689 102 ntBASIC4.32□□□□□ -1.72
LTBQ06643 RPL17P50-201ENST00000396131 546 ntBASIC4.32□□□□□ -1.72
LTBQ06643 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.32□□□□□ -1.72
LTBQ06643 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LTBQ06643 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.32□□□□□ -1.72
LTBQ06643 LINC00993-201ENST00000420453 540 ntBASIC4.32□□□□□ -1.72
LTBQ06643 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.32□□□□□ -1.72
LTBQ06643 RPL7P57-201ENST00000423238 740 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.32□□□□□ -1.72
LTBQ06643 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.32□□□□□ -1.72
LTBQ06643 CENPIP1-201ENST00000425713 902 ntBASIC4.32□□□□□ -1.72
LTBQ06643 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.32□□□□□ -1.72
LTBQ06643 HMGB1P45-201ENST00000435986 653 ntBASIC4.32□□□□□ -1.72
LTBQ06643 MTCYBP34-201ENST00000439552 670 ntBASIC4.32□□□□□ -1.72
LTBQ06643 MTND3P1-201ENST00000441336 220 ntBASIC4.32□□□□□ -1.72
LTBQ06643 RPS26P30-201ENST00000443431 335 ntBASIC4.32□□□□□ -1.72
LTBQ06643 MRPL48P1-201ENST00000445390 636 ntBASIC4.32□□□□□ -1.72
LTBQ06643 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.32□□□□□ -1.72
LTBQ06643 CCDC75P1-201ENST00000469247 791 ntBASIC4.32□□□□□ -1.72
LTBQ06643 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.32□□□□□ -1.72
LTBQ06643 AC091959.2-201ENST00000477363 321 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AC083829.1-201ENST00000503756 657 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.32□□□□□ -1.72
LTBQ06643 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LTBQ06643 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.32□□□□□ -1.72
LTBQ06643 MTND1P5-201ENST00000517906 940 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AC083923.1-201ENST00000523708 376 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.32□□□□□ -1.72
LTBQ06643 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.32□□□□□ -1.72
LTBQ06643 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LTBQ06643 AP000619.3-201ENST00000535634 1127 ntBASIC4.32□□□□□ -1.72
LTBQ06643 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
LTBQ06643 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.32□□□□□ -1.72
LTBQ06643 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.32□□□□□ -1.72
LTBQ06643 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.32□□□□□ -1.72
LTBQ06643 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.32□□□□□ -1.72
LTBQ06643 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.32□□□□□ -1.72
LTBQ06643 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.32□□□□□ -1.72
LTBQ06643 AC027104.1-201ENST00000563702 681 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms