Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC091488.1-201ENST00000604239 660 ntBASIC4.88□□□□□ -1.63
HOXD12P35452 AC080013.3-201ENST00000606839 578 ntBASIC4.88□□□□□ -1.63
HOXD12P35452 AP005137.2-201ENST00000609238 400 ntBASIC4.88□□□□□ -1.63
HOXD12P35452 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXD12P35452 AL450489.1-201ENST00000612071 468 ntBASIC4.88□□□□□ -1.63
HOXD12P35452 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD12P35452 AL603755.1-201ENST00000619504 163 ntBASIC4.88□□□□□ -1.63
HOXD12P35452 AC139792.2-201ENST00000624218 587 ntBASIC4.88□□□□□ -1.63
HOXD12P35452 DCAF13P3-201ENST00000561147 1334 ntBASIC4.88□□□□□ -1.63
HOXD12P35452 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD12P35452 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD12P35452 EIF2AP4-201ENST00000424793 1781 ntBASIC4.88□□□□□ -1.63
HOXD12P35452 AL022322.2-201ENST00000624072 20397 ntBASIC4.88□□□□□ -1.63
HOXD12P35452 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD12P35452 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXD12P35452 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXD12P35452 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD12P35452 NCLP2-201ENST00000416078 1462 ntBASIC4.88□□□□□ -1.63
HOXD12P35452 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXD12P35452 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
HOXD12P35452 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
HOXD12P35452 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 AP005901.5-201ENST00000545779 1796 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXD12P35452 RNU6-707P-201ENST00000364647 95 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 SNORD116-1-201ENST00000384335 95 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXD12P35452 AL390316.1-201ENST00000406279 553 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 RNU4-72P-201ENST00000410754 173 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD12P35452 USP9YP26-201ENST00000421008 661 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 CENPIP1-201ENST00000425713 902 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 MTCO1P3-201ENST00000429327 192 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 RPL7AP49-201ENST00000429522 581 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AL591438.1-201ENST00000433508 581 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD12P35452 UBE2D3P1-201ENST00000436669 444 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD12P35452 AL162591.2-201ENST00000449634 317 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HOXD12P35452 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.87□□□□□ -1.63
HOXD12P35452 AL133477.1-201ENST00000457472 514 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.87□□□□□ -1.63
HOXD12P35452 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 AC090686.1-201ENST00000481577 749 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD12P35452 SCARNA22-201ENST00000503991 125 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD12P35452 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD12P35452 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD12P35452 AC012339.2-201ENST00000523996 453 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD12P35452 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXD12P35452 AC027369.5-201ENST00000533838 755 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AC006349.1-201ENST00000555526 235 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD12P35452 AC087465.1-201ENST00000560574 245 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 MIR4277-201ENST00000578298 84 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD12P35452 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD12P35452 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD12P35452 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD12P35452 AC005191.1-201ENST00000603950 358 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AC010680.4-201ENST00000605334 543 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AL158042.1-201ENST00000605338 460 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AC245008.1-201ENST00000608123 476 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 OR6R2P-201ENST00000609216 300 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AC009090.3-201ENST00000616553 565 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD12P35452 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXD12P35452 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD12P35452 AC103706.2-201ENST00000638080 240 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 ZNF33CP-201ENST00000432492 2030 ntBASIC4.87□□□□□ -1.63
HOXD12P35452 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD12P35452 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD12P35452 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXD12P35452 AC068254.2-201ENST00000623938 3577 ntBASIC4.86□□□□□ -1.63
HOXD12P35452 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXD12P35452 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HOXD12P35452 AC007390.2-201ENST00000606229 3803 ntBASIC4.86□□□□□ -1.63
HOXD12P35452 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXD12P35452 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXD12P35452 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXD12P35452 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
HOXD12P35452 Y_RNA.192-201ENST00000363977 102 ntBASIC4.86□□□□□ -1.63
HOXD12P35452 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXD12P35452 GAPDHP49-201ENST00000421421 961 ntBASIC4.86□□□□□ -1.63
HOXD12P35452 AC011233.1-201ENST00000422812 283 ntBASIC4.86□□□□□ -1.63
HOXD12P35452 RPL23AP1-201ENST00000428990 471 ntBASIC4.86□□□□□ -1.63
HOXD12P35452 MTND1P32-201ENST00000433043 938 ntBASIC4.86□□□□□ -1.63
HOXD12P35452 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXD12P35452 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms