Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.45□□□□□ -1.38
ERCC3P19447 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 BTBD10P1-201ENST00000549824 1352 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.44□□□□□ -1.38
ERCC3P19447 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC3P19447 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC3P19447 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
ERCC3P19447 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC3P19447 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ERCC3P19447 RNA5SP507-201ENST00000363603 121 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 RNVU1-3-201ENST00000364313 161 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 RNU6-769P-201ENST00000384407 104 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.44□□□□□ -1.38
ERCC3P19447 MTATP6P27-201ENST00000416987 621 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 COX6CP17-201ENST00000421389 185 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC3P19447 AC007742.1-201ENST00000425789 329 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC3P19447 AL590399.2-201ENST00000427536 309 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 CEACAMP1-201ENST00000434624 1035 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 RPS20P1-201ENST00000434853 354 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 OR52B5P-201ENST00000435337 951 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 ELOCP26-201ENST00000436067 329 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 MTND1P1-201ENST00000445453 368 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC3P19447 AC104563.1-201ENST00000476147 376 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 RN7SL222P-201ENST00000476452 299 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.44□□□□□ -1.38
ERCC3P19447 AC004453.1-201ENST00000487895 408 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC3P19447 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
ERCC3P19447 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.44□□□□□ -1.38
ERCC3P19447 RNU6-314P-201ENST00000516574 104 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 RN7SKP99-201ENST00000517028 307 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 IGLV3-24-201ENST00000517477 197 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 FTH1P11-201ENST00000517577 551 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.44□□□□□ -1.38
ERCC3P19447 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC3P19447 AC126177.5-201ENST00000549599 178 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.44□□□□□ -1.38
ERCC3P19447 MIR4700-201ENST00000578311 74 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.44□□□□□ -1.38
ERCC3P19447 AC103710.1-201ENST00000610003 901 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 AC009318.4-201ENST00000620496 486 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.44□□□□□ -1.38
ERCC3P19447 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
ERCC3P19447 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.44□□□□□ -1.38
ERCC3P19447 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC3P19447 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
ERCC3P19447 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC3P19447 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC3P19447 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
ERCC3P19447 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC3P19447 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC3P19447 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC3P19447 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
ERCC3P19447 RNU6-28P-201ENST00000362378 107 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 RNU6-853P-201ENST00000364306 107 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 RNY4P34-201ENST00000364779 95 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 SNORD82-201ENST00000365530 70 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC3P19447 SNORA5.1-201ENST00000384275 131 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 Y_RNA.582-201ENST00000391023 95 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 RPS3AP3-201ENST00000411933 242 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC3P19447 SPA17P1-201ENST00000416656 452 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 MTND1P23-201ENST00000416931 372 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.43□□□□□ -1.38
ERCC3P19447 MTCO2P5-201ENST00000422621 426 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 NANOGP6-201ENST00000429190 847 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC3P19447 USP9YP34-201ENST00000453983 808 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.43□□□□□ -1.38
ERCC3P19447 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC3P19447 RPL15P21-201ENST00000495592 567 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 RNF138P1-201ENST00000502765 546 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.43□□□□□ -1.38
ERCC3P19447 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.43□□□□□ -1.38
ERCC3P19447 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
ERCC3P19447 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC3P19447 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC3P19447 AL121594.2-201ENST00000541658 472 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 AC092470.1-201ENST00000546187 132 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 HMGN2P6-201ENST00000551091 273 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC3P19447 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.43□□□□□ -1.38
ERCC3P19447 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC3P19447 AC009977.1-201ENST00000586015 570 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.43□□□□□ -1.38
ERCC3P19447 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.43□□□□□ -1.38
ERCC3P19447 AC024940.4-201ENST00000605507 246 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 AL513477.2-201ENST00000607858 568 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 AC068944.2-201ENST00000610373 403 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.43□□□□□ -1.38
ERCC3P19447 AC138649.3-201ENST00000622154 254 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.43□□□□□ -1.38
ERCC3P19447 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
ERCC3P19447 MTND5P26-201ENST00000426018 1752 ntBASIC6.43□□□□□ -1.38
ERCC3P19447 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms