Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.28□□□□□ -1.88
CD74P04233 COX6B1P7-201ENST00000430845 235 ntBASIC3.28□□□□□ -1.88
CD74P04233 MOB1AP1-201ENST00000430903 535 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC091390.1-201ENST00000433904 331 ntBASIC3.28□□□□□ -1.88
CD74P04233 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.28□□□□□ -1.88
CD74P04233 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.28□□□□□ -1.88
CD74P04233 MTND2P21-201ENST00000436242 1042 ntBASIC3.28□□□□□ -1.88
CD74P04233 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD74P04233 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.28□□□□□ -1.88
CD74P04233 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.28□□□□□ -1.88
CD74P04233 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.28□□□□□ -1.88
CD74P04233 MTND2P8-201ENST00000450555 1025 ntBASIC3.28□□□□□ -1.88
CD74P04233 HMGB1P26-201ENST00000452520 628 ntBASIC3.28□□□□□ -1.88
CD74P04233 RPL38P1-201ENST00000460914 211 ntBASIC3.28□□□□□ -1.88
CD74P04233 RPL7P48-201ENST00000461513 746 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC007537.2-201ENST00000472093 511 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC084198.1-201ENST00000477747 402 ntBASIC3.28□□□□□ -1.88
CD74P04233 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD74P04233 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.28□□□□□ -1.88
CD74P04233 PRELID3BP5-201ENST00000508612 460 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC093770.1-201ENST00000511559 571 ntBASIC3.28□□□□□ -1.88
CD74P04233 RNU2-58P-201ENST00000516403 183 ntBASIC3.28□□□□□ -1.88
CD74P04233 RNU6-362P-201ENST00000516736 90 ntBASIC3.28□□□□□ -1.88
CD74P04233 HMGB1P46-201ENST00000520062 610 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.28□□□□□ -1.88
CD74P04233 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.28□□□□□ -1.88
CD74P04233 MTND5P21-201ENST00000531961 522 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC009643.1-201ENST00000532030 391 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.28□□□□□ -1.88
CD74P04233 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CD74P04233 CENPUP2-201ENST00000555897 1186 ntBASIC3.28□□□□□ -1.88
CD74P04233 MIR4738-201ENST00000579134 87 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.28□□□□□ -1.88
CD74P04233 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.28□□□□□ -1.88
CD74P04233 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.28□□□□□ -1.88
CD74P04233 AC055764.2-201ENST00000610089 670 ntBASIC3.28□□□□□ -1.88
CD74P04233 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CD74P04233 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CD74P04233 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.28□□□□□ -1.88
CD74P04233 AF127577.6-201ENST00000623352 2191 ntBASIC3.28□□□□□ -1.88
CD74P04233 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD74P04233 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD74P04233 AC119744.1-201ENST00000454746 1715 ntBASIC3.27□□□□□ -1.89
CD74P04233 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.27□□□□□ -1.89
CD74P04233 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD74P04233 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD74P04233 AC126755.2-208ENST00000327792 462 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC138969.1-213ENST00000331436 462 ntBASIC3.27□□□□□ -1.89
CD74P04233 RNU6-283P-201ENST00000364788 107 ntBASIC3.27□□□□□ -1.89
CD74P04233 RNU6-356P-201ENST00000384140 107 ntBASIC3.27□□□□□ -1.89
CD74P04233 HMGB1P13-201ENST00000406019 642 ntBASIC3.27□□□□□ -1.89
CD74P04233 BTF3P10-201ENST00000433415 495 ntBASIC3.27□□□□□ -1.89
CD74P04233 RANP8-201ENST00000444720 713 ntBASIC3.27□□□□□ -1.89
CD74P04233 AL513343.1-201ENST00000451818 792 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.27□□□□□ -1.89
CD74P04233 RPS20P32-201ENST00000456044 356 ntBASIC3.27□□□□□ -1.89
CD74P04233 RNU7-170P-201ENST00000459303 61 ntBASIC3.27□□□□□ -1.89
CD74P04233 RPS23P7-201ENST00000466210 444 ntBASIC3.27□□□□□ -1.89
CD74P04233 RPL23AP14-201ENST00000468281 468 ntBASIC3.27□□□□□ -1.89
CD74P04233 SNRPGP3-201ENST00000469405 227 ntBASIC3.27□□□□□ -1.89
CD74P04233 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.27□□□□□ -1.89
CD74P04233 AC078785.3-201ENST00000476607 425 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC093267.1-201ENST00000489176 961 ntBASIC3.27□□□□□ -1.89
CD74P04233 RN7SL604P-201ENST00000492589 296 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC078817.1-201ENST00000492623 435 ntBASIC3.27□□□□□ -1.89
CD74P04233 MTCO1P31-201ENST00000506355 492 ntBASIC3.27□□□□□ -1.89
CD74P04233 HPRT1P1-201ENST00000509498 657 ntBASIC3.27□□□□□ -1.89
CD74P04233 IGKV2-23-201ENST00000518729 323 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC087369.1-201ENST00000520775 996 ntBASIC3.27□□□□□ -1.89
CD74P04233 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.27□□□□□ -1.89
CD74P04233 PTP4A1P6-201ENST00000531034 478 ntBASIC3.27□□□□□ -1.89
CD74P04233 CYCSP29-201ENST00000533731 318 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.27□□□□□ -1.89
CD74P04233 TVP23BP1-201ENST00000557500 617 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.27□□□□□ -1.89
CD74P04233 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.27□□□□□ -1.89
CD74P04233 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.27□□□□□ -1.89
CD74P04233 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD74P04233 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.27□□□□□ -1.89
CD74P04233 RPL12P25-202ENST00000598100 674 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.27□□□□□ -1.89
CD74P04233 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.27□□□□□ -1.89
CD74P04233 AL137849.1-201ENST00000604767 169 ntBASIC3.27□□□□□ -1.89
CD74P04233 AL365503.1-201ENST00000605247 905 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC012557.1-201ENST00000607115 611 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC083809.1-201ENST00000615051 472 ntBASIC3.27□□□□□ -1.89
CD74P04233 AL118508.4-201ENST00000624142 1176 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC015726.3-201ENST00000624501 418 ntBASIC3.27□□□□□ -1.89
CD74P04233 U6.98-201ENST00000637157 84 ntBASIC3.27□□□□□ -1.89
CD74P04233 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.27□□□□□ -1.89
CD74P04233 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
CD74P04233 RIOK3P1-201ENST00000418778 1528 ntBASIC3.27□□□□□ -1.89
CD74P04233 NMD3P1-201ENST00000439704 1488 ntBASIC3.27□□□□□ -1.89
CD74P04233 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD74P04233 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD74P04233 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD74P04233 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
CD74P04233 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.26□□□□□ -1.89
CD74P04233 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms