Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFP01375 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFP01375 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFP01375 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFP01375 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TNFP01375 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.44□□□□□ -1.86
TNFP01375 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFP01375 AC017100.2-201ENST00000584628 355 ntBASIC3.44□□□□□ -1.86
TNFP01375 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFP01375 AC020914.4-201ENST00000597690 277 ntBASIC3.44□□□□□ -1.86
TNFP01375 MFSD8-233ENST00000641482 4860 ntBASIC3.44□□□□□ -1.86
TNFP01375 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
TNFP01375 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.44□□□□□ -1.86
TNFP01375 NCAPGP1-201ENST00000505112 1814 ntBASIC3.44□□□□□ -1.86
TNFP01375 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TNFP01375 CDY3P-201ENST00000454543 1618 ntBASIC3.44□□□□□ -1.86
TNFP01375 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFP01375 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFP01375 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFP01375 CEP170P1-201ENST00000502249 4587 ntBASIC3.43□□□□□ -1.86
TNFP01375 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFP01375 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFP01375 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TNFP01375 NR1H5P-201ENST00000452683 1377 ntBASIC3.43□□□□□ -1.86
TNFP01375 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TNFP01375 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.43□□□□□ -1.86
TNFP01375 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFP01375 RPL21P109-201ENST00000422213 475 ntBASIC3.43□□□□□ -1.86
TNFP01375 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFP01375 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFP01375 MTCO3P20-201ENST00000454926 688 ntBASIC3.43□□□□□ -1.86
TNFP01375 HSPE1P22-201ENST00000456856 327 ntBASIC3.43□□□□□ -1.86
TNFP01375 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFP01375 RPL23AP71-201ENST00000470966 469 ntBASIC3.43□□□□□ -1.86
TNFP01375 RN7SL601P-201ENST00000471221 293 ntBASIC3.43□□□□□ -1.86
TNFP01375 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
TNFP01375 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFP01375 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.43□□□□□ -1.86
TNFP01375 SNORA70.24-201ENST00000517233 118 ntBASIC3.43□□□□□ -1.86
TNFP01375 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.43□□□□□ -1.86
TNFP01375 AL031985.2-201ENST00000600955 480 ntBASIC3.43□□□□□ -1.86
TNFP01375 AL161756.2-201ENST00000604597 246 ntBASIC3.43□□□□□ -1.86
TNFP01375 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.43□□□□□ -1.86
TNFP01375 MIR486-1-201ENST00000612171 68 ntBASIC3.43□□□□□ -1.86
TNFP01375 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFP01375 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFP01375 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
TNFP01375 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TNFP01375 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFP01375 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
TNFP01375 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
TNFP01375 AC006504.1-201ENST00000562493 3666 ntBASIC3.42□□□□□ -1.86
TNFP01375 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TNFP01375 OR52E6-202ENST00000379946 954 ntBASIC3.42□□□□□ -1.86
TNFP01375 RN7SKP56-201ENST00000410513 331 ntBASIC3.42□□□□□ -1.86
TNFP01375 AMD1P2-201ENST00000412936 992 ntBASIC3.42□□□□□ -1.86
TNFP01375 MTND4P22-201ENST00000413116 1169 ntBASIC3.42□□□□□ -1.86
TNFP01375 HSFY4P-201ENST00000415994 1181 ntBASIC3.42□□□□□ -1.86
TNFP01375 RPS20P1-201ENST00000434853 354 ntBASIC3.42□□□□□ -1.86
TNFP01375 HMGB1P16-201ENST00000447155 540 ntBASIC3.42□□□□□ -1.86
TNFP01375 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.42□□□□□ -1.86
TNFP01375 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.42□□□□□ -1.86
TNFP01375 AC005229.2-201ENST00000456995 399 ntBASIC3.42□□□□□ -1.86
TNFP01375 RN7SL594P-201ENST00000470590 287 ntBASIC3.42□□□□□ -1.86
TNFP01375 AC073522.1-201ENST00000483312 377 ntBASIC3.42□□□□□ -1.86
TNFP01375 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.42□□□□□ -1.86
TNFP01375 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TNFP01375 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.42□□□□□ -1.86
TNFP01375 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.42□□□□□ -1.86
TNFP01375 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.42□□□□□ -1.86
TNFP01375 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.42□□□□□ -1.86
TNFP01375 AP006248.2-201ENST00000623309 592 ntBASIC3.42□□□□□ -1.86
TNFP01375 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.42□□□□□ -1.86
TNFP01375 AL645937.1-201ENST00000641739 1652 ntBASIC3.42□□□□□ -1.86
TNFP01375 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TNFP01375 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TNFP01375 OTUD4P1-201ENST00000237841 3067 ntBASIC3.42□□□□□ -1.86
TNFP01375 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TNFP01375 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.42□□□□□ -1.86
TNFP01375 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TNFP01375 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TNFP01375 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.41□□□□□ -1.86
TNFP01375 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TNFP01375 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TNFP01375 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.41□□□□□ -1.86
TNFP01375 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.41□□□□□ -1.86
TNFP01375 RPF2P1-201ENST00000424137 906 ntBASIC3.41□□□□□ -1.86
TNFP01375 MOB1AP1-201ENST00000430903 535 ntBASIC3.41□□□□□ -1.86
TNFP01375 NPM1P48-201ENST00000436002 853 ntBASIC3.41□□□□□ -1.86
TNFP01375 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.41□□□□□ -1.86
TNFP01375 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.41□□□□□ -1.86
TNFP01375 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.41□□□□□ -1.86
TNFP01375 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.41□□□□□ -1.86
TNFP01375 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.41□□□□□ -1.86
TNFP01375 RPS4XP10-201ENST00000465034 731 ntBASIC3.41□□□□□ -1.86
TNFP01375 NPM1P17-201ENST00000479221 602 ntBASIC3.41□□□□□ -1.86
TNFP01375 AC106872.2-201ENST00000494303 480 ntBASIC3.41□□□□□ -1.86
TNFP01375 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.41□□□□□ -1.86
TNFP01375 SETP14-201ENST00000497538 873 ntBASIC3.41□□□□□ -1.86
TNFP01375 MIR2114-201ENST00000516645 80 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms