Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.66□□□□□ -1.82
SEMA3DO95025 OR8F1P-201ENST00000425243 930 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.66□□□□□ -1.82
SEMA3DO95025 RSL24D1P6-201ENST00000426934 401 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 RPS27AP12-201ENST00000429552 465 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AL117339.2-201ENST00000430475 180 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.66□□□□□ -1.82
SEMA3DO95025 AC007563.3-201ENST00000433233 371 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.66□□□□□ -1.82
SEMA3DO95025 Z74696.2-201ENST00000436514 498 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.66□□□□□ -1.82
SEMA3DO95025 Z99127.2-201ENST00000441426 334 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.66□□□□□ -1.82
SEMA3DO95025 RPL21P89-201ENST00000444021 467 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AL353898.1-201ENST00000444055 238 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
SEMA3DO95025 RN7SL330P-201ENST00000469709 307 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AC108941.1-201ENST00000502853 530 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 CDH12P2-201ENST00000504393 298 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.66□□□□□ -1.82
SEMA3DO95025 PCNAP1-201ENST00000505363 709 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.66□□□□□ -1.82
SEMA3DO95025 AC021146.1-201ENST00000511202 716 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AC023141.12-201ENST00000512399 199 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 MTCO1P35-201ENST00000515270 228 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 RNU2-58P-201ENST00000516403 183 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SEMA3DO95025 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.66□□□□□ -1.82
SEMA3DO95025 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.66□□□□□ -1.82
SEMA3DO95025 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.66□□□□□ -1.82
SEMA3DO95025 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.66□□□□□ -1.82
SEMA3DO95025 AC006270.2-201ENST00000578523 652 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 MIR5047-201ENST00000579212 100 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.66□□□□□ -1.82
SEMA3DO95025 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.66□□□□□ -1.82
SEMA3DO95025 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.66□□□□□ -1.82
SEMA3DO95025 AC022387.2-201ENST00000604050 448 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.66□□□□□ -1.82
SEMA3DO95025 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SEMA3DO95025 RPL23AP61-201ENST00000623642 466 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 U6.98-201ENST00000637157 84 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SEMA3DO95025 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SEMA3DO95025 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.66□□□□□ -1.82
SEMA3DO95025 SEPT7P7-201ENST00000420492 1301 ntBASIC3.66□□□□□ -1.82
SEMA3DO95025 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SEMA3DO95025 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.65□□□□□ -1.82
SEMA3DO95025 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SEMA3DO95025 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SEMA3DO95025 GABPAP-201ENST00000419271 1356 ntBASIC3.65□□□□□ -1.82
SEMA3DO95025 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SEMA3DO95025 AF127577.6-201ENST00000623352 2191 ntBASIC3.65□□□□□ -1.82
SEMA3DO95025 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SEMA3DO95025 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SEMA3DO95025 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.65□□□□□ -1.83
SEMA3DO95025 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SEMA3DO95025 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SEMA3DO95025 GSTA12P-201ENST00000402398 508 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 PPIAP31-201ENST00000405422 495 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 HMGB1P13-201ENST00000406019 642 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 AC127526.1-201ENST00000417526 366 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.65□□□□□ -1.83
SEMA3DO95025 AC244453.4-201ENST00000419150 388 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 RFESDP1-201ENST00000422350 461 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 ELOCP6-201ENST00000429066 328 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 ARF4P2-201ENST00000430209 526 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 OR4C10P-201ENST00000434991 931 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.65□□□□□ -1.83
SEMA3DO95025 DNAJC19P1-201ENST00000455312 319 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 ELOCP12-201ENST00000458706 328 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 RPS4XP15-201ENST00000489210 795 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.65□□□□□ -1.83
SEMA3DO95025 AC021146.7-201ENST00000509604 775 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 RN7SKP209-201ENST00000516888 304 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.65□□□□□ -1.83
SEMA3DO95025 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.65□□□□□ -1.83
SEMA3DO95025 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
SEMA3DO95025 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
SEMA3DO95025 PARP1P2-201ENST00000556806 195 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.65□□□□□ -1.83
SEMA3DO95025 AL133457.1-201ENST00000564251 987 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 ZNF192P1-203ENST00000565888 810 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.65□□□□□ -1.83
SEMA3DO95025 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.65□□□□□ -1.83
SEMA3DO95025 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.65□□□□□ -1.83
SEMA3DO95025 AL606490.9-201ENST00000603331 271 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 AC073111.2-201ENST00000605657 1075 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 AL354760.1-201ENST00000608357 643 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.65□□□□□ -1.83
SEMA3DO95025 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.65□□□□□ -1.83
SEMA3DO95025 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SEMA3DO95025 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SEMA3DO95025 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SEMA3DO95025 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SEMA3DO95025 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SEMA3DO95025 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SEMA3DO95025 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.65□□□□□ -1.83
SEMA3DO95025 AL592494.2-201ENST00000425455 1548 ntBASIC3.65□□□□□ -1.83
SEMA3DO95025 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms