Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL442639.1-201ENST00000625030 1899 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 RNU4-21P-201ENST00000362802 126 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 RNU6-492P-201ENST00000363035 104 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 SUGT1P1-201ENST00000379514 476 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 SNORD116-23-201ENST00000384645 92 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL139098.1-201ENST00000407291 389 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 RN7SKP142-201ENST00000411236 328 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC068533.2-201ENST00000411872 306 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC004022.2-201ENST00000413824 193 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC002069.1-201ENST00000429649 1159 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 PRELID3BP10-201ENST00000431957 584 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 MTCO2P3-201ENST00000442543 421 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 COX6CP2-201ENST00000444980 225 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 OR6C5P-201ENST00000452388 923 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 RPS5P7-201ENST00000456664 608 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC090142.1-201ENST00000465776 462 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC109486.1-201ENST00000486833 374 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC022447.1-201ENST00000515358 464 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 HIGD1AP6-201ENST00000521833 279 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AP001207.1-201ENST00000524051 481 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 HMGN2P47-201ENST00000559378 272 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC138915.2-201ENST00000569776 97 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 MIR4433B-201ENST00000581329 102 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 HMGB2P1-201ENST00000591146 634 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 MTCYBP22-201ENST00000603788 447 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 FAM27B-201ENST00000610601 213 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 MTND5P29-201ENST00000458676 1807 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC096656.1-201ENST00000623826 1364 ntBASIC4.39□□□□□ -1.71
TRBV5-3A0A0A0MS03 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC093849.1-201ENST00000563631 2209 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 ATP5F1P4-201ENST00000397288 746 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 PGBD4P8-201ENST00000412993 562 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 AF274854.1-201ENST00000413236 615 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 CHEK2P3-201ENST00000416118 248 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 BOLA3P4-201ENST00000418151 400 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 PDSS1P1-201ENST00000422953 1114 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 OR5BE1P-201ENST00000425977 939 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 MGAT2P2-201ENST00000427194 797 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 RPL36AP33-201ENST00000450395 310 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC010733.1-201ENST00000451515 401 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 ZNF114P1-201ENST00000453500 292 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 RN7SL41P-201ENST00000476144 297 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 RN7SL727P-201ENST00000482164 296 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC090013.1-201ENST00000485147 480 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC108022.1-201ENST00000493466 478 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 MTCO1P30-201ENST00000515244 580 ntBASIC4.38□□□□□ -1.71
TRBV5-3A0A0A0MS03 RN7SKP147-201ENST00000517154 244 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms