Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 LINC02471-203ENST00000641941 4752 ntBASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC005261.6-201ENST00000623072 1387 ntBASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 SNORA7.4-201ENST00000384249 137 ntBASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 AL139132.1-201ENST00000431587 344 ntBASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC107083.1-201ENST00000439643 279 ntBASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC006363.1-201ENST00000603806 463 ntBASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.58□□□□□ -1.52
BIVM-ERCC5R4GMW8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 RNA5SP39-201ENST00000411245 120 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC002075.2-201ENST00000425207 252 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 YWHAEP5-201ENST00000431545 765 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC025750.2-201ENST00000442609 450 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC099560.2-201ENST00000457554 255 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 RPL7P48-201ENST00000461513 746 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC010469.1-201ENST00000463864 576 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 MIR2682-201ENST00000580305 110 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC010680.3-201ENST00000604215 520 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AL162274.2-201ENST00000614406 332 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC006386.2-201ENST00000624491 75 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC012005.1-201ENST00000624575 75 ntBASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.57□□□□□ -1.52
BIVM-ERCC5R4GMW8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC093698.1-201ENST00000423843 571 ntBASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 AL158071.1-201ENST00000430315 461 ntBASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 MTND6P32-201ENST00000457611 483 ntBASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC008885.1-201ENST00000514930 301 ntBASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 BRDTP1-201ENST00000605735 677 ntBASIC5.56□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC139713.2-215ENST00000641428 5037 ntBASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 AL513302.2-201ENST00000562313 1842 ntBASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 FTH1P11-201ENST00000517577 551 ntBASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC005242.1-201ENST00000585658 438 ntBASIC5.55□□□□□ -1.52
BIVM-ERCC5R4GMW8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 FCF1P3-201ENST00000496394 590 ntBASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 SCARNA20.6-201ENST00000517251 106 ntBASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC006518.1-201ENST00000541449 943 ntBASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 CR383656.14-201ENST00000551951 406 ntBASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 AL157817.1-201ENST00000614264 790 ntBASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC119674.1-212ENST00000641155 993 ntBASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 AC017007.4-201ENST00000503353 1352 ntBASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 CR383658.2-201ENST00000547576 1525 ntBASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
BIVM-ERCC5R4GMW8 ZNF807-201ENST00000328088 1707 ntBASIC5.53□□□□□ -1.52
BIVM-ERCC5R4GMW8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BIVM-ERCC5R4GMW8 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.53□□□□□ -1.52
BIVM-ERCC5R4GMW8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BIVM-ERCC5R4GMW8 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms