Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 AC139426.3-201ENST00000605648 2059 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 Y_RNA.152-201ENST00000363578 100 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 RNU6-266P-201ENST00000364225 107 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 Y_RNA.396-201ENST00000383949 103 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 RNU6-890P-201ENST00000384121 107 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 MIR548I2-201ENST00000408348 149 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 RNU7-182P-201ENST00000459009 62 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 RNU6-256P-201ENST00000516747 97 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 RN7SKP99-201ENST00000517028 307 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 MIR3146-201ENST00000580367 79 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 GLUD1P4-201ENST00000590914 418 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.51□□□□□ -1.05
PHF8Q9UPP1 AC123769.1-201ENST00000530992 3192 ntBASIC8.51□□□□□ -1.05
PHF8Q9UPP1 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 Y_RNA.350-201ENST00000365409 98 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 Y_RNA.493-201ENST00000384422 102 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AL031679.1-201ENST00000400616 525 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 RPS3AP2-201ENST00000407190 754 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 RPS15AP30-201ENST00000420976 390 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AC245884.2-201ENST00000426257 404 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 RSL24D1P6-201ENST00000426934 401 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AC093156.1-201ENST00000440382 670 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 RPL36AP15-201ENST00000444514 266 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 KPNA2P1-201ENST00000458289 1591 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 RNU7-180P-201ENST00000459240 63 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 RPL38P3-201ENST00000484463 213 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 RNU6-1213P-201ENST00000517075 94 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AP003497.1-201ENST00000528472 562 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AC023157.2-201ENST00000540596 141 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AC022404.1-201ENST00000555320 273 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AL118558.2-201ENST00000556294 238 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 RPL21P12-201ENST00000559810 515 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 SNORD39.2-201ENST00000579995 76 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AC110743.1-201ENST00000584870 478 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AC011626.1-201ENST00000604710 562 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 RPL12P48-201ENST00000605620 304 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 MIR8062-201ENST00000621515 85 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AC008013.2-202ENST00000637965 364 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 AC116667.2-201ENST00000641075 823 ntBASIC8.5□□□□□ -1.05
PHF8Q9UPP1 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.5□□□□□ -1.05
PHF8Q9UPP1 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms