Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MTND4P33-201ENST00000556706 766 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC022655.2-201ENST00000577280 318 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 PCNAP1-202ENST00000595299 752 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC092106.3-201ENST00000611308 722 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC017104.4-201ENST00000636283 1592 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 RNU6-543P-201ENST00000362576 108 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 RNU6-353P-201ENST00000364266 108 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 SNORA70C-201ENST00000384538 135 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 MIR1179-201ENST00000408703 91 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 RNA5SP317-201ENST00000410176 116 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 RNA5SP311-201ENST00000411290 116 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 TAF13P2-201ENST00000416876 286 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AL513175.2-201ENST00000422071 443 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC010099.3-201ENST00000423896 409 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 YWHAEP5-201ENST00000431545 765 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AL353093.1-201ENST00000441292 436 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AL035551.1-201ENST00000446931 348 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AL589880.1-201ENST00000448271 287 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 NUTF2P7-201ENST00000453086 375 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC103987.1-201ENST00000473394 348 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 UBA52P3-201ENST00000491303 382 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC093824.1-201ENST00000508796 343 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 RNA5SP315-201ENST00000516340 116 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 RNA5SP312-201ENST00000517068 116 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 NPM1P6-201ENST00000521088 871 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC025260.1-201ENST00000548858 430 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 ATP5F1P7-201ENST00000567330 760 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC145350.1-201ENST00000567426 208 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC005412.1-201ENST00000580812 1049 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 VN1R78P-201ENST00000597393 564 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AL591034.3-201ENST00000605511 685 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC092954.1-201ENST00000609121 445 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC064801.1-201ENST00000612025 407 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC138907.10-201ENST00000623708 983 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AL121594.5-201ENST00000631724 573 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC090897.3-201ENST00000636973 1157 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 BX649567.1-201ENST00000642071 1134 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 DDX18P4-201ENST00000511690 1966 ntBASIC4.5□□□□□ -1.69
SIX4Q9UIU6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SIX4Q9UIU6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AP001273.1-201ENST00000624493 3152 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC090971.4-201ENST00000560291 1800 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 RNU4-51P-201ENST00000364206 140 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC107081.1-201ENST00000414975 361 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 RPS23P10-201ENST00000416185 486 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC073136.2-201ENST00000417282 849 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 PDSS1P1-201ENST00000422953 1114 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms