Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AL807761.1-201ENST00000417622 171 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AL606495.1-201ENST00000422100 813 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AL121882.1-201ENST00000422893 417 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 OR4F13P-201ENST00000428478 931 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 UBE2V1P5-201ENST00000440070 405 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AC092170.1-201ENST00000440211 356 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AC002542.1-201ENST00000440683 193 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AC233982.1-201ENST00000451247 436 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 RAD23BP3-201ENST00000454157 1152 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 RN7SL481P-201ENST00000477764 299 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AC073522.1-201ENST00000483312 377 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 RPL21P47-201ENST00000483696 477 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AC124283.4-201ENST00000581815 456 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AC017100.2-201ENST00000584628 355 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AL139395.1-201ENST00000603662 160 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AC114781.5-201ENST00000615297 108 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AL163051.2-201ENST00000618976 735 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AC011944.2-201ENST00000624440 683 ntBASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
CHRNA9Q9UGM1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC116096.1-201ENST00000566804 2314 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 MIR525-201ENST00000384978 85 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 ENSAP1-201ENST00000392855 326 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 RPL23AP26-201ENST00000412728 464 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC008173.1-201ENST00000418901 264 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC004552.1-201ENST00000419089 348 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 RPL21P110-201ENST00000433345 446 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 TVP23BP2-201ENST00000455082 615 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 RPS26P3-201ENST00000470205 348 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 SETP6-201ENST00000479329 568 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC090543.2-201ENST00000483963 348 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC004057.1-201ENST00000485827 348 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC124293.1-201ENST00000530034 493 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC063950.1-201ENST00000552036 308 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC006270.2-201ENST00000578523 652 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 IPO5P1-202ENST00000600039 287 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC068790.5-201ENST00000602741 355 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC012603.1-201ENST00000606424 528 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AL109659.3-201ENST00000624985 950 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 AC132825.7-201ENST00000638744 335 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 MAPK10-253ENST00000641010 4072 ntBASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CHRNA9Q9UGM1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 MIR383-201ENST00000362257 73 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 RNU6-792P-201ENST00000363490 107 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 RNU6-796P-201ENST00000391086 107 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 ATP5F1P6-201ENST00000402768 767 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 FAR2P2-201ENST00000413041 594 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 CYP4F29P-201ENST00000420685 446 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms