Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RNA5SP498-201ENST00000411342 120 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AL662791.1-201ENST00000441992 928 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC092001.1-201ENST00000453012 261 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 RN7SL443P-201ENST00000464331 290 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC022133.1-201ENST00000490961 571 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 OR51K1P-201ENST00000510214 950 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC016559.2-201ENST00000510759 359 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 RNU6-314P-201ENST00000516574 104 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 RN7SKP260-201ENST00000516907 149 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 PSMB7P1-201ENST00000556349 514 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 UBE2FP2-201ENST00000566646 462 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC011487.3-201ENST00000593607 453 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC092954.2-201ENST00000609103 430 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC091834.1-201ENST00000614543 472 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC119674.1-212ENST00000641155 993 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC026951.1-201ENST00000559530 2459 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC092111.2-201ENST00000611627 1414 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 Y_RNA.9-201ENST00000362354 101 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 RNU6-839P-201ENST00000363347 108 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 RNVU1-6-201ENST00000364688 164 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 RNU4-12P-201ENST00000365233 139 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 SNORA2.3-201ENST00000383920 135 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 SNORA66-201ENST00000384792 133 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AL161909.1-201ENST00000397390 712 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 SNORA77-201ENST00000408716 125 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC068533.2-201ENST00000411872 306 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC079809.1-201ENST00000415468 276 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 LINC00993-201ENST00000420453 540 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC009237.2-201ENST00000421358 284 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 RPL36AP15-201ENST00000444514 266 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC114755.5-201ENST00000447760 831 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 COX6CP18-201ENST00000448769 222 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 PSPHP1-201ENST00000450062 261 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AL672167.3-201ENST00000465951 960 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AP000852.1-201ENST00000472460 573 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 SNX5P1-201ENST00000505757 1041 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC009101.1-201ENST00000568135 242 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AP001004.1-201ENST00000582468 324 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AL117336.2-201ENST00000602435 335 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AC087283.1-201ENST00000604029 1074 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 AL365503.1-201ENST00000605247 905 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms