Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AL590396.2-201ENST00000636511 1041 ntBASIC4.16□□□□□ -1.74
DDX47Q9H0S4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.16□□□□□ -1.74
DDX47Q9H0S4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX47Q9H0S4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.16□□□□□ -1.74
DDX47Q9H0S4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX47Q9H0S4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX47Q9H0S4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
DDX47Q9H0S4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
DDX47Q9H0S4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
DDX47Q9H0S4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.74
DDX47Q9H0S4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RNU1-18P-201ENST00000363062 164 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RNU6-609P-201ENST00000365459 107 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RNU6-1293P-201ENST00000384077 107 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RPL26P29-201ENST00000415623 438 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC114814.2-201ENST00000419195 485 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RPS12P23-201ENST00000419579 400 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 MTCO1P43-201ENST00000431831 488 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RPL37P1-201ENST00000432310 284 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 FABP5P3-201ENST00000437960 408 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 HMGB1P48-201ENST00000446155 598 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 DNAJC19P8-201ENST00000452887 259 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RPS29P33-201ENST00000456717 146 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RN7SL93P-201ENST00000463035 293 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RPL37P6-202ENST00000464216 403 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC126121.1-201ENST00000482313 553 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC098799.1-201ENST00000504752 800 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC093720.1-201ENST00000505681 714 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC008628.1-201ENST00000508663 265 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC099522.1-202ENST00000514718 367 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AP003049.1-201ENST00000529418 457 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 EIF1P6-201ENST00000600054 334 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC092474.3-201ENST00000603022 568 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC005191.1-201ENST00000603950 358 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AP003117.2-201ENST00000606010 545 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 VN1R9P-201ENST00000614184 867 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 MIR6864-201ENST00000617935 70 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RNU6-156P-201ENST00000621869 107 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 ASNSP1-204ENST00000641977 1664 ntBASIC4.15□□□□□ -1.75
DDX47Q9H0S4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DDX47Q9H0S4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 Y_RNA.110-201ENST00000363220 99 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 RNU6-1339P-201ENST00000363574 91 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AL161909.1-201ENST00000397390 712 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 RNU2-72P-201ENST00000411175 163 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC008173.1-201ENST00000418901 264 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 OR5AW1P-201ENST00000426334 1006 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 RPS6P12-201ENST00000432491 726 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC009263.1-201ENST00000441193 1239 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 FABP3P2-201ENST00000453169 399 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 NDUFA12P1-201ENST00000455914 406 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC041039.1-201ENST00000485656 536 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC106872.2-201ENST00000494303 480 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AL442163.2-201ENST00000553912 710 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC005776.1-201ENST00000603164 290 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC005972.3-201ENST00000606304 481 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 OR6R2P-201ENST00000609216 300 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms