Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC126389.1-201ENST00000477436 290 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 RN7SL57P-201ENST00000493687 290 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 BTG4P1-201ENST00000510421 183 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 Y_RNA.703-201ENST00000516846 111 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 RNA5SP454-201ENST00000517231 127 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 SNORA81.3-201ENST00000517283 198 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AC098848.2-201ENST00000588023 330 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AP001029.3-201ENST00000588063 596 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 RN7SL544P-201ENST00000617232 284 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 RN7SL763P-201ENST00000620922 284 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL25A1Q9BXS0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL25A1Q9BXS0 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.34□□□□□ -1.4
COL25A1Q9BXS0 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC6.34□□□□□ -1.4
COL25A1Q9BXS0 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.34□□□□□ -1.4
COL25A1Q9BXS0 MAPK10-383ENST00000642032 3390 ntBASIC6.34□□□□□ -1.4
COL25A1Q9BXS0 GTF2H2B-203ENST00000508065 1432 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC022325.1-201ENST00000502748 2199 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 Y_RNA.14-201ENST00000362415 103 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RN7SKP95-201ENST00000362860 303 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RNU6-450P-201ENST00000364654 107 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RHOT1P2-201ENST00000366423 333 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RNU6-98P-201ENST00000384173 107 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RNU6-601P-201ENST00000384540 107 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 MIR192-201ENST00000384915 110 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 SAR1AP2-201ENST00000392696 594 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RNU6-101P-201ENST00000410323 104 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 VDAC1P9-201ENST00000412766 841 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AL451074.5-201ENST00000415894 435 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AL139396.1-201ENST00000421137 167 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 EIF4EP1-201ENST00000422311 642 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RPL7L1P10-201ENST00000427790 463 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AL360081.1-201ENST00000428299 555 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AL445466.1-201ENST00000448432 357 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC006512.1-201ENST00000468816 291 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RPL7P5-201ENST00000471472 736 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC058823.1-201ENST00000485315 474 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 TRBVA-201ENST00000498804 316 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 PGAM1P13-201ENST00000507497 754 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RNU6-1004P-201ENST00000516584 111 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC123904.2-201ENST00000548059 300 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AL049779.2-201ENST00000553847 315 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC093519.1-201ENST00000566109 298 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AL513327.3-201ENST00000602618 469 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC018690.1-201ENST00000608144 626 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC091953.2-201ENST00000623979 160 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC026634.1-201ENST00000634369 198 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 AC003985.2-201ENST00000562268 1669 ntBASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
COL25A1Q9BXS0 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms