Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM5Q96HC4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM5Q96HC4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 XIAPP3-201ENST00000312918 795 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 SNORD74.4-201ENST00000364129 80 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 RNA5SP167-201ENST00000365461 116 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 RNU6-925P-201ENST00000384629 104 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 CYB5AP4-201ENST00000396692 399 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 EIF5P1-201ENST00000400019 1231 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 P2RY10P2-201ENST00000416730 913 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC004552.1-201ENST00000419089 348 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AL732292.1-201ENST00000426692 226 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 RPS29P17-201ENST00000430795 166 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 CKS1BP5-201ENST00000434172 273 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 RPL23AP89-201ENST00000439324 255 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC005002.1-201ENST00000447458 540 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 HMGN3P1-201ENST00000453847 193 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 RAD23BP3-201ENST00000454157 1152 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 MTND2P28-201ENST00000457540 1044 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 RPS26P3-201ENST00000470205 348 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 RN7SL585P-201ENST00000470538 280 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC090543.2-201ENST00000483963 348 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC004057.1-201ENST00000485827 348 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 PRELID3BP4-201ENST00000515476 571 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 RNU6-334P-201ENST00000517072 102 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 SCARNA1-201ENST00000517138 166 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 RNU4-60P-201ENST00000517239 135 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 HIGD1AP6-201ENST00000521833 279 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC068339.2-201ENST00000534395 618 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 MTCYBP28-201ENST00000566728 1132 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AL009028.1-201ENST00000604895 802 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AL355816.2-201ENST00000610049 647 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AC097504.1-201ENST00000515103 2415 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 ZNF849P-201ENST00000594711 1566 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 AL122126.1-201ENST00000546905 1318 ntBASIC4.18□□□□□ -1.74
PDLIM5Q96HC4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 TMSB4XP8-201ENST00000402089 135 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 RN7SKP235-201ENST00000410662 305 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 TMSB4XP6-201ENST00000415187 135 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 AC246680.2-201ENST00000422106 389 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 TMSB4XP1-201ENST00000424567 135 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 CNOT7P1-201ENST00000429006 852 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 USP9YP7-201ENST00000436723 430 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 RPS26P30-201ENST00000443431 335 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 USP9YP32-201ENST00000452432 430 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 RPL7P32-201ENST00000457119 744 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 AP000893.1-201ENST00000474462 794 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 AC007686.1-201ENST00000488511 463 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 RPL35P6-201ENST00000490024 372 ntBASIC4.17□□□□□ -1.74
PDLIM5Q96HC4 RN7SL691P-201ENST00000494487 301 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms