Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 AL133457.1-201ENST00000564251 987 ntBASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 AC015726.1-201ENST00000602353 681 ntBASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 AC006254.3-201ENST00000603353 884 ntBASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 AC016252.1-201ENST00000609721 474 ntBASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 AC091905.1-201ENST00000624400 311 ntBASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.12□□□□□ -1.91
ZNF439Q8NDP4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 EI24P2-201ENST00000397776 1076 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 CCNB2P1-201ENST00000399411 1150 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 PPIAP31-201ENST00000405422 495 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 ZNF602P-201ENST00000405929 924 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 Y_RNA.625-201ENST00000411256 107 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 RPL30P2-201ENST00000414021 291 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC127526.1-201ENST00000417526 366 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 RPL21P109-201ENST00000422213 475 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 RAB28P3-201ENST00000448325 597 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 OR9M1P-201ENST00000459641 921 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 HMGB1P21-201ENST00000502313 581 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 MTCO1P35-201ENST00000515270 228 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 RN7SKP209-201ENST00000516888 304 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 SCARNA14-201ENST00000516903 136 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 RNU6-352P-201ENST00000516908 107 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AL389895.1-201ENST00000554127 252 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 OR4U1P-201ENST00000554958 912 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 SNORA62.6-201ENST00000606322 83 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC243654.2-201ENST00000612843 443 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AC139769.3-201ENST00000618383 175 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 PRO1804-201ENST00000623780 2050 ntBASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF439Q8NDP4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 RNA5SP283-201ENST00000365604 119 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 HIGD1AP12-201ENST00000427832 281 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 MTCYBP21-201ENST00000443300 1113 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 DNAJC19P1-201ENST00000455312 319 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AL035404.1-201ENST00000497982 568 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 MTATP6P22-201ENST00000507369 598 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 RNA5SP164-201ENST00000516533 110 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AP004242.1-201ENST00000533701 349 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 NF1P5-201ENST00000588287 448 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AL606490.9-201ENST00000603331 271 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AL161912.3-201ENST00000605404 628 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 BRDTP1-201ENST00000605735 677 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AL354760.1-201ENST00000608357 643 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms