Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 EIF1P6-201ENST00000600054 334 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 BNIP3P26-201ENST00000600827 554 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 DUXAP11-201ENST00000603858 526 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AP005137.2-201ENST00000609238 400 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC008121.2-201ENST00000614647 523 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 MIR7973-1-201ENST00000614683 76 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 RMST_9.1-201ENST00000619945 193 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 MIR7154-201ENST00000620673 73 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 DDX18P3-201ENST00000404856 2007 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 RARSP1-201ENST00000542842 1418 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AP000526.1-201ENST00000603308 1388 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 ZNF542P-204ENST00000482727 1305 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 Y_RNA.51-201ENST00000362725 102 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 RN7SKP224-201ENST00000364140 325 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 RNU4-24P-201ENST00000364565 139 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 SNORD116-4-201ENST00000384733 96 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 MIR708-201ENST00000390708 88 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 MIR1303-201ENST00000408625 86 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 RNU6-77P-201ENST00000410554 91 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC098592.1-201ENST00000419352 333 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AP001324.1-201ENST00000428553 399 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC007559.1-201ENST00000428736 355 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 ELOCP8-201ENST00000439309 332 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 ELOCP15-201ENST00000442090 332 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 HMGB1P16-201ENST00000447155 540 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC005229.2-201ENST00000456995 399 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 TRBV8-2-201ENST00000475637 270 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 RN7SL177P-201ENST00000476596 299 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 MTND5P13-201ENST00000513046 1079 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 SCARNA21.2-201ENST00000516600 166 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AP001880.2-201ENST00000538233 448 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC023161.2-201ENST00000551218 780 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC079171.1-201ENST00000568788 914 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC119751.7-201ENST00000600494 245 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC006539.2-201ENST00000601729 572 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AL590229.1-201ENST00000603497 542 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC010738.1-201ENST00000604970 987 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AL139418.1-201ENST00000613613 177 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC121761.2-201ENST00000617300 689 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC087385.3-201ENST00000620477 187 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 MIR4278-201ENST00000636094 69 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AP000776.1-201ENST00000530032 1663 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 IQCB2P-201ENST00000401788 1633 ntBASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
CLIP4Q8N3C7 AC093775.1-201ENST00000624154 1868 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL355852.1-201ENST00000454081 1771 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 MTND4P5-201ENST00000435821 1374 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 MTND4P31-201ENST00000425607 1343 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 RNU6-623P-201ENST00000363143 105 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 RNU6-304P-201ENST00000364855 107 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms