Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 RPL21P109-201ENST00000422213 475 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC117440.1-201ENST00000474107 571 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC021678.1-201ENST00000505195 936 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC011266.1-201ENST00000624119 3569 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC068647.1-201ENST00000489539 2265 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 HSPE1P27-201ENST00000430808 296 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 YWHAEP5-201ENST00000431545 765 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 HMGN2P47-201ENST00000559378 272 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 BTBD10P1-201ENST00000549824 1352 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 CR383658.2-201ENST00000547576 1525 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 CCDC75P1-201ENST00000469247 791 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC025445.1-201ENST00000502728 300 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC091826.1-201ENST00000514065 313 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 NANOGNBP1-201ENST00000448444 480 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 SLC31A1P1-201ENST00000451221 567 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC005242.1-201ENST00000585658 438 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AL162274.2-201ENST00000614406 332 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC233309.1-201ENST00000619522 751 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 OOSP1P1-201ENST00000423265 274 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 RPL23AP82-202ENST00000427528 469 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 CENPBD1P1-201ENST00000464061 469 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 MIR4319-201ENST00000577285 85 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 MIR7851-201ENST00000610611 160 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC139713.2-210ENST00000641741 992 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 MIR513A2-201ENST00000385249 127 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AL121834.1-202ENST00000404494 277 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 OR2X1P-201ENST00000421144 687 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 COTL1P1-201ENST00000422309 375 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC006028.1-201ENST00000438379 402 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC092809.1-201ENST00000441469 474 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 AL137790.1-201ENST00000634283 177 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms