Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VARS2Q5ST30 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
VARS2Q5ST30 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VARS2Q5ST30 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
VARS2Q5ST30 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VARS2Q5ST30 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VARS2Q5ST30 HAUS6P2-201ENST00000433254 2404 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 RNY4P28-201ENST00000365281 93 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 SNORD94-201ENST00000386037 137 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC004386.1-201ENST00000393214 761 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 RPL7AP51-201ENST00000422016 760 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 SPATA20P1-201ENST00000423089 438 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 AHCYP8-201ENST00000425108 209 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 RHOT1P3-201ENST00000436571 331 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 AL390119.1-201ENST00000440329 312 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC114495.1-201ENST00000441274 436 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC144530.1-201ENST00000452862 555 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 RNU7-169P-201ENST00000459456 61 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 RN7SL379P-201ENST00000479912 293 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC096745.1-201ENST00000509945 370 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 SNORA14.1-201ENST00000516113 141 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC012339.2-201ENST00000523996 453 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 AC006023.2-201ENST00000609916 167 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 AL080312.2-201ENST00000613001 630 ntBASIC7.4□□□□□ -1.22
VARS2Q5ST30 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
VARS2Q5ST30 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.4□□□□□ -1.22
VARS2Q5ST30 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.4□□□□□ -1.23
VARS2Q5ST30 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.4□□□□□ -1.23
VARS2Q5ST30 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.4□□□□□ -1.23
VARS2Q5ST30 AC097634.1-201ENST00000604491 2467 ntBASIC7.4□□□□□ -1.23
VARS2Q5ST30 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
VARS2Q5ST30 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.4□□□□□ -1.23
VARS2Q5ST30 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
VARS2Q5ST30 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
VARS2Q5ST30 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
VARS2Q5ST30 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
VARS2Q5ST30 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
VARS2Q5ST30 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 EOGT-210ENST00000615922 1931 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 AC129502.1-201ENST00000623261 1654 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 RNU6-1127P-201ENST00000384580 107 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 RNU6-1151P-201ENST00000384684 107 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 SNORD115-46-201ENST00000390982 71 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 AC016769.2-201ENST00000414815 475 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 RPL36AP36-201ENST00000418616 301 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 AL035090.1-201ENST00000454835 332 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 RPL21P71-201ENST00000465598 459 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 RN7SL70P-201ENST00000478322 302 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 AL359273.1-201ENST00000510918 627 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 AC026371.1-201ENST00000551867 419 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 SULT1C2P1-202ENST00000562418 459 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 AC007448.1-201ENST00000582714 234 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 DLEU1_1.1-201ENST00000618107 190 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 MTND1P7-201ENST00000632801 297 ntBASIC7.39□□□□□ -1.23
VARS2Q5ST30 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms