Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.48□□□□□ -1.69
PRAMEP78395 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.48□□□□□ -1.69
PRAMEP78395 AC022069.1-201ENST00000582910 658 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 AC015688.2-201ENST00000584523 262 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 AC008759.1-201ENST00000589783 983 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.48□□□□□ -1.69
PRAMEP78395 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.48□□□□□ -1.69
PRAMEP78395 AC068790.7-201ENST00000602347 528 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 RPL26P30-202ENST00000602923 645 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 AC024940.4-201ENST00000605507 246 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 AC106052.1-201ENST00000608029 497 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRAMEP78395 AC105227.2-201ENST00000615075 605 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 AC100827.5-201ENST00000615883 426 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 AL121895.2-201ENST00000619558 447 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 AC006065.6-201ENST00000625201 545 ntBASIC4.48□□□□□ -1.69
PRAMEP78395 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRAMEP78395 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.48□□□□□ -1.69
PRAMEP78395 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
PRAMEP78395 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PRAMEP78395 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRAMEP78395 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRAMEP78395 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PRAMEP78395 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRAMEP78395 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
PRAMEP78395 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRAMEP78395 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PRAMEP78395 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRAMEP78395 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.47□□□□□ -1.69
PRAMEP78395 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PRAMEP78395 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.47□□□□□ -1.69
PRAMEP78395 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.47□□□□□ -1.69
PRAMEP78395 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.47□□□□□ -1.69
PRAMEP78395 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRAMEP78395 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRAMEP78395 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PRAMEP78395 HMGB1P5-201ENST00000255320 642 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 RNU6-839P-201ENST00000363347 108 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 RNA5SP22-201ENST00000365393 109 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PRAMEP78395 SNORA70F-201ENST00000384142 135 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 SNORD116-23-201ENST00000384645 92 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 HSPD1P16-201ENST00000402302 394 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AL133264.1-201ENST00000407157 562 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AL139098.1-201ENST00000407291 389 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.47□□□□□ -1.69
PRAMEP78395 MTATP6P20-201ENST00000414147 562 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AC008280.1-201ENST00000418851 412 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 RPS15AP40-201ENST00000419621 391 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 SAGE2P-201ENST00000420011 2126 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 UQCRBP1-201ENST00000421129 336 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.47□□□□□ -1.69
PRAMEP78395 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.47□□□□□ -1.69
PRAMEP78395 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.47□□□□□ -1.69
PRAMEP78395 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.47□□□□□ -1.69
PRAMEP78395 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 NPM1P34-201ENST00000428821 893 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 USP9YP24-201ENST00000434374 697 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 NANOGP2-201ENST00000435391 727 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 USP9YP17-201ENST00000444617 696 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.47□□□□□ -1.69
PRAMEP78395 RPL23AP43-201ENST00000446445 471 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.47□□□□□ -1.69
PRAMEP78395 AC079776.3-201ENST00000450665 370 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 FGF7P3-201ENST00000454645 303 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.47□□□□□ -1.69
PRAMEP78395 RPL37P6-202ENST00000464216 403 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 RPS20P21-201ENST00000466859 343 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 HMGB1P21-201ENST00000502313 581 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.47□□□□□ -1.69
PRAMEP78395 RN7SKP82-201ENST00000516786 223 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 RNA5SP135-201ENST00000517019 125 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.47□□□□□ -1.69
PRAMEP78395 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.47□□□□□ -1.69
PRAMEP78395 MTND2P32-201ENST00000521584 1038 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRAMEP78395 PTP4A1P6-201ENST00000531034 478 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.47□□□□□ -1.69
PRAMEP78395 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.47□□□□□ -1.69
PRAMEP78395 AL161713.1-201ENST00000555538 145 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AGGF1P8-201ENST00000562979 1000 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AC124068.1-201ENST00000563131 678 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.47□□□□□ -1.69
PRAMEP78395 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.47□□□□□ -1.69
PRAMEP78395 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.47□□□□□ -1.69
PRAMEP78395 VN1R83P-201ENST00000595685 445 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AC010201.1-201ENST00000605051 540 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AC026790.2-201ENST00000606282 430 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AL354760.1-201ENST00000608357 643 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AC020634.1-201ENST00000608701 549 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AL138478.1-201ENST00000612252 832 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AL138721.1-201ENST00000616756 179 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AC007546.2-201ENST00000623996 360 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 AL049536.1-201ENST00000625043 744 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 MIR6715B-201ENST00000637172 77 ntBASIC4.47□□□□□ -1.69
PRAMEP78395 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.47□□□□□ -1.69
PRAMEP78395 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PRAMEP78395 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms