Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.39□□□□□ -1.55
RHBDL3P58872 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.39□□□□□ -1.55
RHBDL3P58872 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDL3P58872 RN7SL98P-201ENST00000462271 300 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 RPL23AP44-201ENST00000482216 473 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.39□□□□□ -1.55
RHBDL3P58872 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.39□□□□□ -1.55
RHBDL3P58872 RNA5SP497-201ENST00000516081 97 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDL3P58872 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDL3P58872 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
RHBDL3P58872 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
RHBDL3P58872 OR5BC1P-201ENST00000529327 739 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 TOMM20P2-201ENST00000540082 421 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDL3P58872 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDL3P58872 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDL3P58872 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDL3P58872 AL009028.1-201ENST00000604895 802 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 AL121895.2-201ENST00000619558 447 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 AC098679.5-201ENST00000624394 571 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RHBDL3P58872 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.39□□□□□ -1.55
RHBDL3P58872 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDL3P58872 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RHBDL3P58872 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDL3P58872 NMD3P1-201ENST00000439704 1488 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RHBDL3P58872 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDL3P58872 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RHBDL3P58872 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDL3P58872 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDL3P58872 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AP005901.5-201ENST00000545779 1796 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 AC008033.1-201ENST00000216407 1162 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDL3P58872 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
RHBDL3P58872 RNA5SP479-201ENST00000364858 117 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 UBBP2-201ENST00000376781 231 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 AL161909.1-201ENST00000397390 712 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 RPS24P12-201ENST00000402084 394 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 AL080315.1-201ENST00000406055 466 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 AC007435.1-201ENST00000421086 415 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDL3P58872 RPL21P43-201ENST00000425440 472 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDL3P58872 SEPT7P5-201ENST00000434048 306 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AC079776.3-201ENST00000450665 370 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 DHFRP3-201ENST00000455595 559 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 AC010301.1-201ENST00000473936 355 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDL3P58872 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AC113420.1-201ENST00000507903 571 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 AC016065.2-201ENST00000514530 444 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDL3P58872 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDL3P58872 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AC022882.1-201ENST00000532142 501 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 CYCSP29-201ENST00000533731 318 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 CYCSP28-201ENST00000534284 321 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDL3P58872 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.38□□□□□ -1.55
RHBDL3P58872 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDL3P58872 GAS5-AS1-201ENST00000602767 694 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 HSPE1P14-201ENST00000605812 302 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 AL157392.4-201ENST00000609756 345 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AL445567.2-201ENST00000618935 498 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 AC091046.2-201ENST00000620775 665 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDL3P58872 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDL3P58872 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDL3P58872 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDL3P58872 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RHBDL3P58872 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDL3P58872 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RHBDL3P58872 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDL3P58872 MTCO1P24-201ENST00000515438 1558 ntBASIC5.38□□□□□ -1.55
RHBDL3P58872 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RHBDL3P58872 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
RHBDL3P58872 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDL3P58872 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDL3P58872 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RHBDL3P58872 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDL3P58872 OR10J6P-201ENST00000289731 930 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 OR5P1P-201ENST00000299512 925 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 RNU6-251P-201ENST00000363235 104 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 SUGT1P1-201ENST00000379514 476 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 AL136310.1-201ENST00000404926 654 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 AL133384.1-201ENST00000412744 351 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms