Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CLDN20P56880 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLDN20P56880 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 Z99496.1-201ENST00000469424 1477 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CLDN20P56880 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN20P56880 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 RNU6-1214P-201ENST00000363650 109 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 RNU6-178P-201ENST00000384631 104 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 MIR93-201ENST00000385024 80 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 ATP5F1P2-201ENST00000398143 760 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 RN7SKP216-201ENST00000411050 312 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 AL450992.3-201ENST00000413192 568 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 AC119751.6-201ENST00000416712 186 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 Z93242.1-201ENST00000427102 353 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN20P56880 USP9YP31-201ENST00000431405 881 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 AC092393.1-201ENST00000439625 742 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 AL138878.2-201ENST00000440581 1241 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 CEACAMP9-201ENST00000442990 513 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 EXTL2P1-201ENST00000446218 416 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 NECAP1P2-201ENST00000455668 727 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN20P56880 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CLDN20P56880 RN7SL738P-201ENST00000470264 297 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 AC109471.1-201ENST00000511631 612 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 FABP5P12-201ENST00000515543 389 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN20P56880 DYNLL1P4-201ENST00000549314 266 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 NBEAP1-201ENST00000554452 979 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.2□□□□□ -1.74
CLDN20P56880 BNIP3P26-201ENST00000600827 554 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN20P56880 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 AP003392.5-201ENST00000607857 415 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 LINC00901.1-201ENST00000617252 152 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN20P56880 AP000346.3-201ENST00000622821 210 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 MIR1322-201ENST00000638013 71 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CLDN20P56880 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CLDN20P56880 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CLDN20P56880 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 ZFRP1-201ENST00000457579 2970 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 DBF4P1-201ENST00000412976 1892 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 DCAF13P3-201ENST00000561147 1334 ntBASIC4.2□□□□□ -1.74
CLDN20P56880 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.2□□□□□ -1.74
CLDN20P56880 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN20P56880 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN20P56880 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN20P56880 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN20P56880 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN20P56880 SNORD113-6-201ENST00000363345 75 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN20P56880 SNORA56-201ENST00000383966 129 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AL049545.1-201ENST00000401856 572 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN20P56880 RNA5SP104-201ENST00000410989 118 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN20P56880 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.19□□□□□ -1.74
CLDN20P56880 MRPS36P1-201ENST00000421291 307 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AL590609.2-201ENST00000421430 368 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 Z74021.1-201ENST00000423610 407 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN20P56880 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN20P56880 RPS6P15-201ENST00000431996 751 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 SEPT7P5-201ENST00000434048 306 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 MTND6P18-201ENST00000439477 513 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 FGF7P5-201ENST00000441829 291 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 RPL23AP76-201ENST00000441860 458 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 PTMAP3-201ENST00000447474 330 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 RPL7P59-201ENST00000447700 943 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN20P56880 COX6CP18-201ENST00000448769 222 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN20P56880 NDUFA12P1-201ENST00000455914 406 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC108734.3-201ENST00000481241 1165 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC025164.1-201ENST00000496249 478 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms