Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC108941.1-201ENST00000502853 530 ntBASIC3.96□□□□□ -1.78
CDH6P55285 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH6P55285 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CDH6P55285 AC005798.1-201ENST00000513715 387 ntBASIC3.96□□□□□ -1.78
CDH6P55285 AC008802.1-201ENST00000519121 791 ntBASIC3.96□□□□□ -1.78
CDH6P55285 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.96□□□□□ -1.78
CDH6P55285 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH6P55285 OR4U1P-201ENST00000554958 912 ntBASIC3.96□□□□□ -1.78
CDH6P55285 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH6P55285 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH6P55285 AL354760.1-201ENST00000608357 643 ntBASIC3.96□□□□□ -1.78
CDH6P55285 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH6P55285 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH6P55285 C2orf27A-204ENST00000623058 969 ntBASIC3.96□□□□□ -1.78
CDH6P55285 AL359715.5-201ENST00000623431 443 ntBASIC3.96□□□□□ -1.78
CDH6P55285 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH6P55285 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDH6P55285 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDH6P55285 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH6P55285 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
CDH6P55285 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH6P55285 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH6P55285 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH6P55285 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH6P55285 AC100871.1-201ENST00000507871 1456 ntBASIC3.95□□□□□ -1.78
CDH6P55285 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH6P55285 RNA5SP322-201ENST00000363617 119 ntBASIC3.95□□□□□ -1.78
CDH6P55285 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.95□□□□□ -1.78
CDH6P55285 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
CDH6P55285 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH6P55285 ZNF602P-201ENST00000405929 924 ntBASIC3.95□□□□□ -1.78
CDH6P55285 AMD1P2-201ENST00000412936 992 ntBASIC3.95□□□□□ -1.78
CDH6P55285 AC244453.4-201ENST00000419150 388 ntBASIC3.95□□□□□ -1.78
CDH6P55285 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH6P55285 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH6P55285 NIPA2P1-201ENST00000426223 976 ntBASIC3.95□□□□□ -1.78
CDH6P55285 IFNNP1-201ENST00000429219 553 ntBASIC3.95□□□□□ -1.78
CDH6P55285 SNORA71B-202ENST00000439232 272 ntBASIC3.95□□□□□ -1.78
CDH6P55285 DNAJC19P1-201ENST00000455312 319 ntBASIC3.95□□□□□ -1.78
CDH6P55285 OR9M1P-201ENST00000459641 921 ntBASIC3.95□□□□□ -1.78
CDH6P55285 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH6P55285 AC107398.1-201ENST00000486904 505 ntBASIC3.95□□□□□ -1.78
CDH6P55285 AC108157.1-201ENST00000510511 539 ntBASIC3.95□□□□□ -1.78
CDH6P55285 RN7SKP21-201ENST00000516503 220 ntBASIC3.95□□□□□ -1.78
CDH6P55285 RNA5SP164-201ENST00000516533 110 ntBASIC3.95□□□□□ -1.78
CDH6P55285 IGKV2D-23-201ENST00000518179 286 ntBASIC3.95□□□□□ -1.78
CDH6P55285 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH6P55285 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH6P55285 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH6P55285 OR4A2P-201ENST00000527276 913 ntBASIC3.95□□□□□ -1.78
CDH6P55285 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH6P55285 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.95□□□□□ -1.78
CDH6P55285 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH6P55285 MIR3160-1-201ENST00000577972 85 ntBASIC3.95□□□□□ -1.78
CDH6P55285 AC053481.4-201ENST00000583164 216 ntBASIC3.95□□□□□ -1.78
CDH6P55285 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH6P55285 AC115085.1-201ENST00000588924 229 ntBASIC3.95□□□□□ -1.78
CDH6P55285 AP003117.1-201ENST00000602771 554 ntBASIC3.95□□□□□ -1.78
CDH6P55285 HMGB1P50-201ENST00000605814 607 ntBASIC3.95□□□□□ -1.78
CDH6P55285 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH6P55285 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH6P55285 AC079684.1-201ENST00000621405 437 ntBASIC3.95□□□□□ -1.78
CDH6P55285 AC068724.3-201ENST00000625906 87 ntBASIC3.95□□□□□ -1.78
CDH6P55285 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH6P55285 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH6P55285 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH6P55285 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH6P55285 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH6P55285 MTCO1P8-201ENST00000416914 1523 ntBASIC3.95□□□□□ -1.78
CDH6P55285 LINC00561-201ENST00000565815 2738 ntBASIC3.94□□□□□ -1.78
CDH6P55285 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH6P55285 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH6P55285 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH6P55285 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH6P55285 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH6P55285 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH6P55285 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH6P55285 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH6P55285 HSPE1P8-201ENST00000406997 288 ntBASIC3.94□□□□□ -1.78
CDH6P55285 RN7SKP263-201ENST00000411194 309 ntBASIC3.94□□□□□ -1.78
CDH6P55285 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH6P55285 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH6P55285 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.94□□□□□ -1.78
CDH6P55285 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH6P55285 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH6P55285 HMGB1P16-201ENST00000447155 540 ntBASIC3.94□□□□□ -1.78
CDH6P55285 HMGB1P5-202ENST00000451497 985 ntBASIC3.94□□□□□ -1.78
CDH6P55285 AL133477.1-201ENST00000457472 514 ntBASIC3.94□□□□□ -1.78
CDH6P55285 AC068587.1-201ENST00000483613 781 ntBASIC3.94□□□□□ -1.78
CDH6P55285 AC090543.1-201ENST00000492168 485 ntBASIC3.94□□□□□ -1.78
CDH6P55285 SNORA70.14-201ENST00000516205 110 ntBASIC3.94□□□□□ -1.78
CDH6P55285 RNA5SP309-201ENST00000516670 106 ntBASIC3.94□□□□□ -1.78
CDH6P55285 RNU6-352P-201ENST00000516908 107 ntBASIC3.94□□□□□ -1.78
CDH6P55285 RNU6-889P-201ENST00000517189 103 ntBASIC3.94□□□□□ -1.78
CDH6P55285 NARSP2-201ENST00000518524 679 ntBASIC3.94□□□□□ -1.78
CDH6P55285 AC107016.1-201ENST00000550463 337 ntBASIC3.94□□□□□ -1.78
CDH6P55285 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH6P55285 AC067852.4-201ENST00000590314 478 ntBASIC3.94□□□□□ -1.78
CDH6P55285 AC067959.1-201ENST00000604334 379 ntBASIC3.94□□□□□ -1.78
CDH6P55285 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms