Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIMK1P53667 AC108064.1-201ENST00000513791 460 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 IGHV3-32-201ENST00000519182 355 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AP003066.2-201ENST00000529375 555 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
LIMK1P53667 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.45□□□□□ -1.7
LIMK1P53667 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LIMK1P53667 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.45□□□□□ -1.7
LIMK1P53667 AC093249.4-201ENST00000564755 259 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC023825.1-201ENST00000566704 1030 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIMK1P53667 AP002906.1-201ENST00000603405 233 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.45□□□□□ -1.7
LIMK1P53667 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 RNA5SP108-201ENST00000605921 117 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC022079.2-201ENST00000619739 566 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIMK1P53667 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LIMK1P53667 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.45□□□□□ -1.7
LIMK1P53667 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIMK1P53667 AC119744.1-201ENST00000454746 1715 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.45□□□□□ -1.7
LIMK1P53667 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIMK1P53667 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
LIMK1P53667 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.45□□□□□ -1.7
LIMK1P53667 DCAF13P1-201ENST00000495256 1330 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 MTND4P9-201ENST00000507819 1346 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
LIMK1P53667 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LIMK1P53667 MTND4P26-201ENST00000415971 1359 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.44□□□□□ -1.7
LIMK1P53667 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LIMK1P53667 AC007685.1-201ENST00000329806 452 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LIMK1P53667 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.44□□□□□ -1.7
LIMK1P53667 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
LIMK1P53667 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LIMK1P53667 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LIMK1P53667 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.44□□□□□ -1.7
LIMK1P53667 AL356095.1-201ENST00000417217 199 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.44□□□□□ -1.7
LIMK1P53667 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.44□□□□□ -1.7
LIMK1P53667 RPS6P14-201ENST00000425165 719 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 OR5AW1P-201ENST00000426334 1006 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 AC091390.3-201ENST00000426478 338 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.44□□□□□ -1.7
LIMK1P53667 RPL5P32-201ENST00000454085 879 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.44□□□□□ -1.7
LIMK1P53667 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.44□□□□□ -1.7
LIMK1P53667 AC005351.1-201ENST00000511152 786 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 RPL7L1P13-201ENST00000511702 739 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.44□□□□□ -1.7
LIMK1P53667 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.44□□□□□ -1.7
LIMK1P53667 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
LIMK1P53667 MTND5P21-201ENST00000531961 522 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 AC139103.1-201ENST00000534696 1030 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.44□□□□□ -1.7
LIMK1P53667 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.44□□□□□ -1.7
LIMK1P53667 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.44□□□□□ -1.7
LIMK1P53667 AL442163.2-201ENST00000553912 710 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.44□□□□□ -1.7
LIMK1P53667 AL139022.2-201ENST00000606934 443 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 RNU6-1192P-201ENST00000612197 107 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
LIMK1P53667 MIR6864-201ENST00000617935 70 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 RNU6-489P-201ENST00000618289 107 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
LIMK1P53667 AL512427.1-201ENST00000618593 349 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 AC010872.1-201ENST00000624225 675 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 AC015813.6-201ENST00000624409 5808 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LIMK1P53667 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 AC009643.2-201ENST00000603543 1448 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LIMK1P53667 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LIMK1P53667 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LIMK1P53667 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.44□□□□□ -1.7
LIMK1P53667 DDX18P5-201ENST00000534547 1306 ntBASIC4.44□□□□□ -1.7
LIMK1P53667 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.44□□□□□ -1.7
LIMK1P53667 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LIMK1P53667 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
LIMK1P53667 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
LIMK1P53667 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.43□□□□□ -1.7
LIMK1P53667 AC068254.2-201ENST00000623938 3577 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LIMK1P53667 AL672167.1-203ENST00000641299 2975 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LIMK1P53667 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.43□□□□□ -1.7
LIMK1P53667 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LIMK1P53667 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LIMK1P53667 RNU5B-4P-201ENST00000363508 111 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.43□□□□□ -1.7
LIMK1P53667 RNU6-1176P-201ENST00000390955 107 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.43□□□□□ -1.7
LIMK1P53667 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.43□□□□□ -1.7
LIMK1P53667 AC115285.1-201ENST00000424879 736 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LIMK1P53667 RPL7P2-201ENST00000427639 268 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms