Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COPB1P53618 AC021146.4-201ENST00000309229 279 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC067945.1-201ENST00000342609 618 ntBASIC4.95□□□□□ -1.62
COPB1P53618 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COPB1P53618 RNU1-94P-201ENST00000362627 173 ntBASIC4.95□□□□□ -1.62
COPB1P53618 RN7SKP149-201ENST00000363008 344 ntBASIC4.95□□□□□ -1.62
COPB1P53618 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.95□□□□□ -1.62
COPB1P53618 Y_RNA.436-201ENST00000384097 102 ntBASIC4.95□□□□□ -1.62
COPB1P53618 RN7SKP222-201ENST00000410651 315 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.95□□□□□ -1.62
COPB1P53618 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.95□□□□□ -1.62
COPB1P53618 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.95□□□□□ -1.62
COPB1P53618 ATG4AP1-201ENST00000416893 538 ntBASIC4.95□□□□□ -1.62
COPB1P53618 BX510359.2-201ENST00000417920 305 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC062016.2-201ENST00000420950 676 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC245028.1-201ENST00000423259 256 ntBASIC4.95□□□□□ -1.62
COPB1P53618 CENPIP1-201ENST00000425713 902 ntBASIC4.95□□□□□ -1.62
COPB1P53618 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.95□□□□□ -1.62
COPB1P53618 AC016831.4-201ENST00000438302 307 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 CEACAMP9-201ENST00000442990 513 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 RPL7L1P1-201ENST00000448259 785 ntBASIC4.95□□□□□ -1.62
COPB1P53618 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COPB1P53618 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.95□□□□□ -1.62
COPB1P53618 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.95□□□□□ -1.62
COPB1P53618 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 MTND3P7-201ENST00000474435 343 ntBASIC4.95□□□□□ -1.62
COPB1P53618 XKRY-201ENST00000510392 1100 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.95□□□□□ -1.62
COPB1P53618 AC093755.1-201ENST00000512950 1023 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC008837.2-201ENST00000513076 418 ntBASIC4.95□□□□□ -1.62
COPB1P53618 RNU6-416P-201ENST00000516265 103 ntBASIC4.95□□□□□ -1.62
COPB1P53618 HMGB1P19-201ENST00000517578 577 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.95□□□□□ -1.62
COPB1P53618 AC134698.5-201ENST00000519444 336 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.95□□□□□ -1.62
COPB1P53618 AP003033.1-201ENST00000527244 415 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 MIR4330-201ENST00000579077 105 ntBASIC4.95□□□□□ -1.62
COPB1P53618 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.95□□□□□ -1.62
COPB1P53618 EIF1P6-201ENST00000600054 334 ntBASIC4.95□□□□□ -1.62
COPB1P53618 BPIFA4P-203ENST00000603168 689 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC105129.3-201ENST00000605455 485 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AL354976.1-201ENST00000613843 387 ntBASIC4.95□□□□□ -1.62
COPB1P53618 MIR6853-201ENST00000619642 74 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COPB1P53618 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.95□□□□□ -1.62
COPB1P53618 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.95□□□□□ -1.62
COPB1P53618 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.95□□□□□ -1.62
COPB1P53618 AL606537.1-201ENST00000607258 2011 ntBASIC4.95□□□□□ -1.62
COPB1P53618 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
COPB1P53618 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
COPB1P53618 AC105074.1-201ENST00000623380 3095 ntBASIC4.95□□□□□ -1.62
COPB1P53618 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COPB1P53618 LINC00622-201ENST00000562811 1570 ntBASIC4.95□□□□□ -1.62
COPB1P53618 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COPB1P53618 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
COPB1P53618 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.94□□□□□ -1.62
COPB1P53618 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 CPHL1P-201ENST00000461341 3407 ntBASIC4.94□□□□□ -1.62
COPB1P53618 Z95327.2-201ENST00000414579 1873 ntBASIC4.94□□□□□ -1.62
COPB1P53618 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COPB1P53618 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COPB1P53618 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COPB1P53618 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 AP000776.1-201ENST00000530032 1663 ntBASIC4.94□□□□□ -1.62
COPB1P53618 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COPB1P53618 FAM3C2-201ENST00000312214 681 ntBASIC4.94□□□□□ -1.62
COPB1P53618 Y_RNA.201-201ENST00000364052 96 ntBASIC4.94□□□□□ -1.62
COPB1P53618 OR1L1-202ENST00000373686 1083 ntBASIC4.94□□□□□ -1.62
COPB1P53618 MIR525-201ENST00000384978 85 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AL078604.1-201ENST00000404609 466 ntBASIC4.94□□□□□ -1.62
COPB1P53618 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.94□□□□□ -1.62
COPB1P53618 VN1R8P-201ENST00000407739 893 ntBASIC4.94□□□□□ -1.62
COPB1P53618 RNU6-77P-201ENST00000410554 91 ntBASIC4.94□□□□□ -1.62
COPB1P53618 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.94□□□□□ -1.62
COPB1P53618 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.94□□□□□ -1.62
COPB1P53618 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.94□□□□□ -1.62
COPB1P53618 AC234781.2-201ENST00000426370 994 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.94□□□□□ -1.62
COPB1P53618 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.94□□□□□ -1.62
COPB1P53618 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.94□□□□□ -1.62
COPB1P53618 AL606662.1-201ENST00000445763 553 ntBASIC4.94□□□□□ -1.62
COPB1P53618 MTCO2P7-201ENST00000446518 666 ntBASIC4.94□□□□□ -1.62
COPB1P53618 RPL31P44-201ENST00000447680 377 ntBASIC4.94□□□□□ -1.62
COPB1P53618 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 AC079776.3-201ENST00000450665 370 ntBASIC4.94□□□□□ -1.62
COPB1P53618 RPL31P3-201ENST00000458430 332 ntBASIC4.94□□□□□ -1.62
COPB1P53618 MTND4LP3-201ENST00000468320 276 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms