Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCN4AP35499 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SCN4AP35499 FAM35BP-202ENST00000497389 3337 ntBASIC4.26□□□□□ -1.73
SCN4AP35499 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCN4AP35499 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SCN4AP35499 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.26□□□□□ -1.73
SCN4AP35499 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCN4AP35499 ZNF807-201ENST00000328088 1707 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCN4AP35499 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SCN4AP35499 AF228730.2-201ENST00000438784 848 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.25□□□□□ -1.73
SCN4AP35499 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN4AP35499 AC124312.4-201ENST00000605533 310 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 AC093732.2-201ENST00000607950 274 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 AC084036.1-201ENST00000609190 508 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN4AP35499 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN4AP35499 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN4AP35499 SRP72P2-201ENST00000344851 1979 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN4AP35499 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.25□□□□□ -1.73
SCN4AP35499 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCN4AP35499 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SCN4AP35499 SNORA80A-201ENST00000363922 136 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN4AP35499 KCTD9P3-201ENST00000434597 1169 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 MRPL35P4-201ENST00000453682 566 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 KC877373.1-201ENST00000479066 408 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.25□□□□□ -1.73
SCN4AP35499 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN4AP35499 OOSP1P2-201ENST00000579644 351 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 AL451007.1-201ENST00000595491 289 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 AL008729.2-201ENST00000606393 473 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 MIR486-1-201ENST00000612171 68 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 AC138932.5-201ENST00000617759 563 ntBASIC4.25□□□□□ -1.73
SCN4AP35499 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN4AP35499 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCN4AP35499 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.25□□□□□ -1.73
SCN4AP35499 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN4AP35499 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
SCN4AP35499 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SCN4AP35499 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN4AP35499 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN4AP35499 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN4AP35499 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN4AP35499 RNA5SP80-201ENST00000410475 111 ntBASIC4.24□□□□□ -1.73
SCN4AP35499 HMGB3P20-201ENST00000417997 600 ntBASIC4.24□□□□□ -1.73
SCN4AP35499 MTND2P11-201ENST00000423638 648 ntBASIC4.24□□□□□ -1.73
SCN4AP35499 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.24□□□□□ -1.73
SCN4AP35499 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.24□□□□□ -1.73
SCN4AP35499 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN4AP35499 SYT14P1-201ENST00000481459 721 ntBASIC4.24□□□□□ -1.73
SCN4AP35499 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.24□□□□□ -1.73
SCN4AP35499 AC017037.1-201ENST00000508460 471 ntBASIC4.24□□□□□ -1.73
SCN4AP35499 HNRNPKP5-201ENST00000515300 253 ntBASIC4.24□□□□□ -1.73
SCN4AP35499 AC027309.2-201ENST00000520566 192 ntBASIC4.24□□□□□ -1.73
SCN4AP35499 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN4AP35499 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN4AP35499 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN4AP35499 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN4AP35499 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.24□□□□□ -1.73
SCN4AP35499 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.24□□□□□ -1.73
SCN4AP35499 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN4AP35499 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SCN4AP35499 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SCN4AP35499 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN4AP35499 PTP4A1P3-201ENST00000433661 420 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.23□□□□□ -1.73
SCN4AP35499 HMGB3P22-202ENST00000451823 572 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 RPS6P4-201ENST00000494693 758 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.23□□□□□ -1.73
SCN4AP35499 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.23□□□□□ -1.73
SCN4AP35499 AC092747.2-201ENST00000545069 983 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 AC006539.2-201ENST00000601729 572 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 AL353684.1-201ENST00000622677 1120 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN4AP35499 UBE3AP2-201ENST00000429033 2259 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN4AP35499 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCN4AP35499 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.23□□□□□ -1.73
SCN4AP35499 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN4AP35499 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN4AP35499 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN4AP35499 OR52B1P-201ENST00000316506 909 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.23□□□□□ -1.73
SCN4AP35499 GSTA8P-201ENST00000404253 637 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 RN7SKP53-201ENST00000411337 315 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 BX323014.1-201ENST00000412876 237 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.23□□□□□ -1.73
SCN4AP35499 TPTE2P3-201ENST00000441562 1189 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN4AP35499 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.23□□□□□ -1.73
SCN4AP35499 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN4AP35499 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SCN4AP35499 MIR6715A-201ENST00000615929 79 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 AL158196.1-201ENST00000616786 434 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 AP003355.3-201ENST00000623465 114 ntBASIC4.23□□□□□ -1.73
SCN4AP35499 AL359757.2-201ENST00000624309 274 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms