Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXC13P31276 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC13P31276 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC13P31276 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXC13P31276 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC13P31276 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC13P31276 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HOXC13P31276 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXC13P31276 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC13P31276 MIR331-201ENST00000362302 94 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 RNA5SP366-201ENST00000365454 123 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 RNU6-481P-201ENST00000384194 107 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXC13P31276 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC13P31276 AC115285.1-201ENST00000424879 736 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 RPL23AP25-201ENST00000430973 463 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC011998.1-201ENST00000433403 117 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 ARL4AP3-201ENST00000441452 574 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC092809.1-201ENST00000441469 474 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 VN1R32P-201ENST00000452234 905 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXC13P31276 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXC13P31276 RPL32P14-201ENST00000463196 378 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 RPS7P7-201ENST00000463499 571 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC008379.1-201ENST00000463655 464 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXC13P31276 RNU6-415P-201ENST00000516252 97 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 RNU4-60P-201ENST00000517239 135 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 SOD1P3-201ENST00000518682 454 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC13P31276 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC13P31276 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC13P31276 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC13P31276 OR4R3P-201ENST00000525084 838 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AP004242.1-201ENST00000533701 349 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 RFPL1S-203ENST00000539579 330 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXC13P31276 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC13P31276 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC13P31276 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC13P31276 AC124283.4-201ENST00000581815 456 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXC13P31276 EIF1P6-201ENST00000600054 334 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC079587.1-201ENST00000603846 277 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC113194.1-201ENST00000606037 500 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC091979.2-201ENST00000607514 214 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC096586.1-201ENST00000610267 561 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC007546.2-201ENST00000623996 360 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC13P31276 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXC13P31276 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXC13P31276 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC13P31276 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXC13P31276 MTCO1P24-201ENST00000515438 1558 ntBASIC4.57□□□□□ -1.68
HOXC13P31276 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC13P31276 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXC13P31276 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HOXC13P31276 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC13P31276 AC005261.4-201ENST00000600047 1385 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 AC104446.1-201ENST00000613728 1321 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC13P31276 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC13P31276 RNU1-44P-201ENST00000384453 163 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 MIR3065-201ENST00000390137 79 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 RPS26P8-201ENST00000393490 348 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 PRRC2CP1-201ENST00000404428 159 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 BTBD10P2-201ENST00000404779 676 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HOXC13P31276 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 UBTFL3-201ENST00000418934 1024 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 CYP4F29P-201ENST00000420685 446 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC13P31276 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC13P31276 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC13P31276 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXC13P31276 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC13P31276 AP000949.1-201ENST00000438328 629 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 UBE2V1P3-201ENST00000439651 417 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 AC092170.1-201ENST00000440211 356 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 snoU13.22-201ENST00000459428 104 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 UBTFL6-201ENST00000477929 1024 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 AC108475.1-201ENST00000507880 950 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.56□□□□□ -1.68
HOXC13P31276 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 RN7SKP277-201ENST00000516895 283 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 RNU6-334P-201ENST00000517072 102 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC13P31276 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 CR383656.14-201ENST00000551951 406 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 AC095057.3-201ENST00000567102 1157 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 RN7SL600P-201ENST00000581811 299 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 MIR3158-1-201ENST00000583596 81 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms