Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RXRBP28702 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.69□□□□□ -1.34
RXRBP28702 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RXRBP28702 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
RXRBP28702 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RXRBP28702 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RXRBP28702 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RXRBP28702 AC138393.1-206ENST00000540997 1886 ntBASIC6.68□□□□□ -1.34
RXRBP28702 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RXRBP28702 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RXRBP28702 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RXRBP28702 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.68□□□□□ -1.34
RXRBP28702 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RXRBP28702 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.68□□□□□ -1.34
RXRBP28702 AL079343.1-201ENST00000572358 1771 ntBASIC6.68□□□□□ -1.34
RXRBP28702 AL353743.4-201ENST00000422653 1547 ntBASIC6.68□□□□□ -1.34
RXRBP28702 SNORA73.1-201ENST00000363107 205 ntBASIC6.68□□□□□ -1.34
RXRBP28702 U3.10-201ENST00000364459 214 ntBASIC6.68□□□□□ -1.34
RXRBP28702 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RXRBP28702 TAF9BP1-201ENST00000396646 746 ntBASIC6.68□□□□□ -1.34
RXRBP28702 RN7SKP202-201ENST00000410439 330 ntBASIC6.68□□□□□ -1.34
RXRBP28702 PIGPP2-201ENST00000411569 458 ntBASIC6.68□□□□□ -1.34
RXRBP28702 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.68□□□□□ -1.34
RXRBP28702 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 OR2B7P-201ENST00000429302 934 ntBASIC6.68□□□□□ -1.34
RXRBP28702 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.68□□□□□ -1.34
RXRBP28702 AL353898.1-201ENST00000444055 238 ntBASIC6.68□□□□□ -1.34
RXRBP28702 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.68□□□□□ -1.34
RXRBP28702 AC013267.1-201ENST00000458227 267 ntBASIC6.68□□□□□ -1.34
RXRBP28702 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.68□□□□□ -1.34
RXRBP28702 RBM43P1-201ENST00000476891 1081 ntBASIC6.68□□□□□ -1.34
RXRBP28702 AC105252.1-201ENST00000503089 286 ntBASIC6.68□□□□□ -1.34
RXRBP28702 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 GLUD1P3-202ENST00000508551 200 ntBASIC6.68□□□□□ -1.34
RXRBP28702 AC109445.1-201ENST00000512356 383 ntBASIC6.68□□□□□ -1.34
RXRBP28702 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.68□□□□□ -1.34
RXRBP28702 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.68□□□□□ -1.34
RXRBP28702 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.68□□□□□ -1.34
RXRBP28702 AC122688.1-201ENST00000541494 223 ntBASIC6.68□□□□□ -1.34
RXRBP28702 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.68□□□□□ -1.34
RXRBP28702 ARF4P1-201ENST00000605447 541 ntBASIC6.68□□□□□ -1.34
RXRBP28702 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.68□□□□□ -1.34
RXRBP28702 AC009159.1-201ENST00000618386 642 ntBASIC6.68□□□□□ -1.34
RXRBP28702 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.68□□□□□ -1.34
RXRBP28702 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.68□□□□□ -1.34
RXRBP28702 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RXRBP28702 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.68□□□□□ -1.34
RXRBP28702 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RXRBP28702 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RXRBP28702 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.68□□□□□ -1.34
RXRBP28702 ZNF402P-201ENST00000404435 3100 ntBASIC6.68□□□□□ -1.34
RXRBP28702 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RXRBP28702 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RXRBP28702 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RXRBP28702 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RXRBP28702 CASC19-206ENST00000641028 1430 ntBASIC6.67□□□□□ -1.34
RXRBP28702 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RXRBP28702 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
RXRBP28702 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RXRBP28702 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
RXRBP28702 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.67□□□□□ -1.34
RXRBP28702 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.67□□□□□ -1.34
RXRBP28702 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RXRBP28702 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RXRBP28702 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RXRBP28702 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RXRBP28702 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.67□□□□□ -1.34
RXRBP28702 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.67□□□□□ -1.34
RXRBP28702 RPL23AP39-201ENST00000415533 405 ntBASIC6.67□□□□□ -1.34
RXRBP28702 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.67□□□□□ -1.34
RXRBP28702 CYCSP10-201ENST00000417973 294 ntBASIC6.67□□□□□ -1.34
RXRBP28702 GTF2IP23-201ENST00000423746 351 ntBASIC6.67□□□□□ -1.34
RXRBP28702 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.67□□□□□ -1.34
RXRBP28702 OR4C10P-201ENST00000434991 931 ntBASIC6.67□□□□□ -1.34
RXRBP28702 AC016831.4-201ENST00000438302 307 ntBASIC6.67□□□□□ -1.34
RXRBP28702 AC007677.1-201ENST00000445757 515 ntBASIC6.67□□□□□ -1.34
RXRBP28702 DPPA3P1-201ENST00000448050 469 ntBASIC6.67□□□□□ -1.34
RXRBP28702 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.67□□□□□ -1.34
RXRBP28702 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.67□□□□□ -1.34
RXRBP28702 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.67□□□□□ -1.34
RXRBP28702 RPL7P19-201ENST00000469948 618 ntBASIC6.67□□□□□ -1.34
RXRBP28702 RPS3AP17-201ENST00000472594 777 ntBASIC6.67□□□□□ -1.34
RXRBP28702 MTCYBP17-201ENST00000503579 789 ntBASIC6.67□□□□□ -1.34
RXRBP28702 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.67□□□□□ -1.34
RXRBP28702 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.67□□□□□ -1.34
RXRBP28702 OR5AK1P-201ENST00000524837 922 ntBASIC6.67□□□□□ -1.34
RXRBP28702 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.67□□□□□ -1.34
RXRBP28702 AC092747.2-201ENST00000545069 983 ntBASIC6.67□□□□□ -1.34
RXRBP28702 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.67□□□□□ -1.34
RXRBP28702 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.67□□□□□ -1.34
RXRBP28702 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.67□□□□□ -1.34
RXRBP28702 AC022432.1-201ENST00000595739 310 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms