Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.5□□□□□ -1.69
PCNAP12004 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCNAP12004 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCNAP12004 HMGB1P5-201ENST00000255320 642 ntBASIC4.5□□□□□ -1.69
PCNAP12004 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PCNAP12004 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCNAP12004 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCNAP12004 Y_RNA.192-201ENST00000363977 102 ntBASIC4.5□□□□□ -1.69
PCNAP12004 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.5□□□□□ -1.69
PCNAP12004 Y_RNA.408-201ENST00000383987 102 ntBASIC4.5□□□□□ -1.69
PCNAP12004 MIR217-201ENST00000384817 110 ntBASIC4.5□□□□□ -1.69
PCNAP12004 RNA5SP372-201ENST00000390836 115 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AL109941.1-201ENST00000401925 229 ntBASIC4.5□□□□□ -1.69
PCNAP12004 FCF1P5-201ENST00000406490 482 ntBASIC4.5□□□□□ -1.69
PCNAP12004 RNA5SP113-201ENST00000410486 84 ntBASIC4.5□□□□□ -1.69
PCNAP12004 RSU1P3-201ENST00000412878 835 ntBASIC4.5□□□□□ -1.69
PCNAP12004 CEACAMP8-201ENST00000413902 580 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC007435.1-201ENST00000421086 415 ntBASIC4.5□□□□□ -1.69
PCNAP12004 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.5□□□□□ -1.69
PCNAP12004 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.5□□□□□ -1.69
PCNAP12004 AC104837.2-201ENST00000427236 424 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.5□□□□□ -1.69
PCNAP12004 H2AFZP5-201ENST00000446960 382 ntBASIC4.5□□□□□ -1.69
PCNAP12004 RPL23AP15-201ENST00000450202 459 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.5□□□□□ -1.69
PCNAP12004 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.5□□□□□ -1.69
PCNAP12004 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.5□□□□□ -1.69
PCNAP12004 RPS3AP41-201ENST00000462701 778 ntBASIC4.5□□□□□ -1.69
PCNAP12004 NDUFA5P9-201ENST00000472609 340 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC025164.1-201ENST00000496249 478 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.5□□□□□ -1.69
PCNAP12004 AC048346.1-201ENST00000510247 144 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC093755.1-201ENST00000512950 1023 ntBASIC4.5□□□□□ -1.69
PCNAP12004 FABP5P12-201ENST00000515543 389 ntBASIC4.5□□□□□ -1.69
PCNAP12004 RNU6-202P-201ENST00000515998 96 ntBASIC4.5□□□□□ -1.69
PCNAP12004 RNU6-885P-201ENST00000516607 104 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.5□□□□□ -1.69
PCNAP12004 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.5□□□□□ -1.69
PCNAP12004 HIGD1AP6-201ENST00000521833 279 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AP001922.4-201ENST00000526967 290 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC023050.2-201ENST00000544968 387 ntBASIC4.5□□□□□ -1.69
PCNAP12004 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.5□□□□□ -1.69
PCNAP12004 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.5□□□□□ -1.69
PCNAP12004 RPL21P7-201ENST00000557463 483 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC009094.1-201ENST00000564443 426 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.5□□□□□ -1.69
PCNAP12004 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCNAP12004 RN7SL652P-201ENST00000577769 300 ntBASIC4.5□□□□□ -1.69
PCNAP12004 MIR4436B2-201ENST00000581415 91 ntBASIC4.5□□□□□ -1.69
PCNAP12004 MIR4436B1-201ENST00000583272 91 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.5□□□□□ -1.69
PCNAP12004 HMGB2P1-201ENST00000591146 634 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.5□□□□□ -1.69
PCNAP12004 AL512782.1-201ENST00000603093 364 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.5□□□□□ -1.69
PCNAP12004 TUSC7.1-201ENST00000610969 165 ntBASIC4.5□□□□□ -1.69
PCNAP12004 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCNAP12004 AC091304.6-201ENST00000619761 202 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AP003485.2-201ENST00000623636 610 ntBASIC4.5□□□□□ -1.69
PCNAP12004 AC055839.1-201ENST00000634467 498 ntBASIC4.5□□□□□ -1.69
PCNAP12004 MTND2P41-201ENST00000637599 773 ntBASIC4.5□□□□□ -1.69
PCNAP12004 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCNAP12004 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.5□□□□□ -1.69
PCNAP12004 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.5□□□□□ -1.69
PCNAP12004 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCNAP12004 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCNAP12004 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
PCNAP12004 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PCNAP12004 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCNAP12004 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PCNAP12004 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.49□□□□□ -1.69
PCNAP12004 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCNAP12004 MIR448-201ENST00000362131 111 ntBASIC4.49□□□□□ -1.69
PCNAP12004 RNU6-839P-201ENST00000363347 108 ntBASIC4.49□□□□□ -1.69
PCNAP12004 Y_RNA.465-201ENST00000384293 102 ntBASIC4.49□□□□□ -1.69
PCNAP12004 SNORA51.12-201ENST00000384448 134 ntBASIC4.49□□□□□ -1.69
PCNAP12004 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.49□□□□□ -1.69
PCNAP12004 GSTM3P2-201ENST00000412746 530 ntBASIC4.49□□□□□ -1.69
PCNAP12004 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCNAP12004 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.49□□□□□ -1.69
PCNAP12004 AC007394.1-201ENST00000421941 531 ntBASIC4.49□□□□□ -1.69
PCNAP12004 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.49□□□□□ -1.69
PCNAP12004 MTCO1P54-201ENST00000430139 712 ntBASIC4.49□□□□□ -1.69
PCNAP12004 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.49□□□□□ -1.69
PCNAP12004 SEPT7P5-201ENST00000434048 306 ntBASIC4.49□□□□□ -1.69
PCNAP12004 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.49□□□□□ -1.69
PCNAP12004 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.49□□□□□ -1.69
PCNAP12004 RPL12P3-201ENST00000440080 396 ntBASIC4.49□□□□□ -1.69
PCNAP12004 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.49□□□□□ -1.69
PCNAP12004 HMGB3P21-201ENST00000452483 547 ntBASIC4.49□□□□□ -1.69
PCNAP12004 HIGD1AP8-201ENST00000453927 274 ntBASIC4.49□□□□□ -1.69
PCNAP12004 AC010469.1-201ENST00000463864 576 ntBASIC4.49□□□□□ -1.69
PCNAP12004 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.49□□□□□ -1.69
PCNAP12004 AC004263.1-201ENST00000479327 332 ntBASIC4.49□□□□□ -1.69
PCNAP12004 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.49□□□□□ -1.69
PCNAP12004 NDUFA5P12-201ENST00000503796 343 ntBASIC4.49□□□□□ -1.69
PCNAP12004 SCARNA22-201ENST00000503991 125 ntBASIC4.49□□□□□ -1.69
PCNAP12004 AC093534.1-201ENST00000504977 132 ntBASIC4.49□□□□□ -1.69
PCNAP12004 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.49□□□□□ -1.69
PCNAP12004 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms