Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
PROM1O43490 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PROM1O43490 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.91□□□□□ -1.62
PROM1O43490 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PROM1O43490 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PROM1O43490 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PROM1O43490 RNU6-621P-201ENST00000364752 109 ntBASIC4.91□□□□□ -1.62
PROM1O43490 RNU1-43P-201ENST00000365052 165 ntBASIC4.91□□□□□ -1.62
PROM1O43490 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.91□□□□□ -1.62
PROM1O43490 Y_RNA.516-201ENST00000384541 124 ntBASIC4.91□□□□□ -1.62
PROM1O43490 MIR600-201ENST00000385007 98 ntBASIC4.91□□□□□ -1.62
PROM1O43490 GSTM3P2-201ENST00000412746 530 ntBASIC4.91□□□□□ -1.62
PROM1O43490 AC007899.1-201ENST00000412776 775 ntBASIC4.91□□□□□ -1.62
PROM1O43490 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.91□□□□□ -1.62
PROM1O43490 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.91□□□□□ -1.62
PROM1O43490 FABP7P2-201ENST00000429946 379 ntBASIC4.91□□□□□ -1.62
PROM1O43490 AC009238.2-201ENST00000431026 355 ntBASIC4.91□□□□□ -1.62
PROM1O43490 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.91□□□□□ -1.62
PROM1O43490 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.91□□□□□ -1.62
PROM1O43490 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.91□□□□□ -1.62
PROM1O43490 CEACAMP7-201ENST00000444105 496 ntBASIC4.91□□□□□ -1.62
PROM1O43490 USP9YP29-201ENST00000445112 563 ntBASIC4.91□□□□□ -1.62
PROM1O43490 TPTE2P6-202ENST00000445572 1007 ntBASIC4.91□□□□□ -1.62
PROM1O43490 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.91□□□□□ -1.62
PROM1O43490 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.91□□□□□ -1.62
PROM1O43490 ACTG1P13-201ENST00000486987 1043 ntBASIC4.91□□□□□ -1.62
PROM1O43490 AC098799.3-201ENST00000506095 438 ntBASIC4.91□□□□□ -1.62
PROM1O43490 IGBP1P5-201ENST00000507524 1000 ntBASIC4.91□□□□□ -1.62
PROM1O43490 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.91□□□□□ -1.62
PROM1O43490 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.91□□□□□ -1.62
PROM1O43490 AC109471.1-201ENST00000511631 612 ntBASIC4.91□□□□□ -1.62
PROM1O43490 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.91□□□□□ -1.62
PROM1O43490 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
PROM1O43490 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.91□□□□□ -1.62
PROM1O43490 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PROM1O43490 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.91□□□□□ -1.62
PROM1O43490 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PROM1O43490 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.91□□□□□ -1.62
PROM1O43490 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.91□□□□□ -1.62
PROM1O43490 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.91□□□□□ -1.62
PROM1O43490 PRPF19P1-201ENST00000584766 898 ntBASIC4.91□□□□□ -1.62
PROM1O43490 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.91□□□□□ -1.62
PROM1O43490 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.91□□□□□ -1.62
PROM1O43490 AC104785.1-201ENST00000603220 588 ntBASIC4.91□□□□□ -1.62
PROM1O43490 AC083899.3-201ENST00000603413 594 ntBASIC4.91□□□□□ -1.62
PROM1O43490 AC087241.4-201ENST00000612441 480 ntBASIC4.91□□□□□ -1.62
PROM1O43490 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.91□□□□□ -1.62
PROM1O43490 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PROM1O43490 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PROM1O43490 LINC01109-201ENST00000603837 3081 ntBASIC4.91□□□□□ -1.62
PROM1O43490 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.91□□□□□ -1.62
PROM1O43490 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.91□□□□□ -1.62
PROM1O43490 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PROM1O43490 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PROM1O43490 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PROM1O43490 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PROM1O43490 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PROM1O43490 AC011447.7-201ENST00000624228 1590 ntBASIC4.91□□□□□ -1.62
PROM1O43490 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PROM1O43490 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PROM1O43490 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PROM1O43490 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.9□□□□□ -1.62
PROM1O43490 AC114947.2-201ENST00000565748 2125 ntBASIC4.9□□□□□ -1.62
PROM1O43490 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PROM1O43490 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PROM1O43490 AC131971.1-201ENST00000332881 1482 ntBASIC4.9□□□□□ -1.62
PROM1O43490 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PROM1O43490 RNY3P10-201ENST00000384764 102 ntBASIC4.9□□□□□ -1.63
PROM1O43490 MIR92A2-201ENST00000385299 75 ntBASIC4.9□□□□□ -1.63
PROM1O43490 MIR765-201ENST00000390226 114 ntBASIC4.9□□□□□ -1.63
PROM1O43490 RNU6-1300P-201ENST00000391046 108 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AL645733.1-201ENST00000402250 217 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AL359643.1-201ENST00000404109 423 ntBASIC4.9□□□□□ -1.63
PROM1O43490 RPL23AP47-201ENST00000408017 460 ntBASIC4.9□□□□□ -1.63
PROM1O43490 OR51A3P-201ENST00000413596 924 ntBASIC4.9□□□□□ -1.63
PROM1O43490 MTND1P23-201ENST00000416931 372 ntBASIC4.9□□□□□ -1.63
PROM1O43490 CYCSP46-201ENST00000423569 204 ntBASIC4.9□□□□□ -1.63
PROM1O43490 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.9□□□□□ -1.63
PROM1O43490 Z74696.2-201ENST00000436514 498 ntBASIC4.9□□□□□ -1.63
PROM1O43490 TRIM60P18-201ENST00000441518 828 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.9□□□□□ -1.63
PROM1O43490 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.9□□□□□ -1.63
PROM1O43490 AL034418.1-201ENST00000448675 860 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.9□□□□□ -1.63
PROM1O43490 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.9□□□□□ -1.63
PROM1O43490 RN7SL222P-201ENST00000476452 299 ntBASIC4.9□□□□□ -1.63
PROM1O43490 RN7SL97P-201ENST00000486780 299 ntBASIC4.9□□□□□ -1.63
PROM1O43490 RN7SL346P-201ENST00000491561 294 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AC010285.3-201ENST00000511668 676 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.9□□□□□ -1.63
PROM1O43490 DUXAP2-201ENST00000519198 589 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AP001207.1-201ENST00000524051 481 ntBASIC4.9□□□□□ -1.63
PROM1O43490 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PROM1O43490 AC024940.3-201ENST00000538551 316 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.9□□□□□ -1.63
PROM1O43490 AC087883.1-201ENST00000551882 391 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PROM1O43490 AC006349.1-201ENST00000555526 235 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms