Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 RNU6-187P-201ENST00000384139 106 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 PGBD4P6-201ENST00000421501 610 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 RPL21P91-201ENST00000429231 479 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 TRBV8-2-201ENST00000475637 270 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC126389.1-201ENST00000477436 290 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC131392.1-201ENST00000506490 633 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC138866.2-201ENST00000508650 584 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 RNU6-1023P-201ENST00000516137 106 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC123904.2-201ENST00000548059 300 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 MIR3118-1-201ENST00000581787 76 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC098848.2-201ENST00000588023 330 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AP001029.3-201ENST00000588063 596 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC018690.1-201ENST00000608144 626 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 AC073488.3-201ENST00000631611 778 ntBASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HPS5Q9UPZ3 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 SAGE3P-201ENST00000619800 1635 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 RPL23AP57-201ENST00000332361 466 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 RNA5SP514-201ENST00000363717 111 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 RPL21P50-201ENST00000417698 477 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC093155.2-201ENST00000420734 937 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC243428.1-201ENST00000421099 264 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC007283.2-201ENST00000424739 197 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 SKA2P1-201ENST00000425592 390 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 RPL7P4-203ENST00000430239 730 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 RPS3AP54-201ENST00000435535 734 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 TRAPPC2P3-201ENST00000443200 321 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AL163193.1-201ENST00000444895 788 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 SNX18P26-201ENST00000458433 740 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC026784.1-201ENST00000507986 352 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC004062.1-201ENST00000509926 645 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 RNU6-410P-201ENST00000517006 107 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 RNU6-1213P-201ENST00000517075 94 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC073916.1-201ENST00000545095 130 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC010547.6-201ENST00000571789 193 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 MIR4701-201ENST00000583094 63 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC067852.5-201ENST00000589299 310 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC020916.2-201ENST00000591242 360 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 AC015967.1-201ENST00000619893 476 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 UG0898H09-202ENST00000623646 7040 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
HPS5Q9UPZ3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 AC005592.1-201ENST00000566527 1640 ntBASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 RNU6-432P-201ENST00000384196 109 ntBASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 Y_RNA.785-201ENST00000384290 109 ntBASIC7.56□□□□□ -1.2
HPS5Q9UPZ3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms