Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC3.76□□□□□ -1.81
KRTAP3-1Q9BYR8 HYDIN2-203ENST00000614586 13885 ntBASIC3.76□□□□□ -1.81
KRTAP3-1Q9BYR8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-1Q9BYR8 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.76□□□□□ -1.81
KRTAP3-1Q9BYR8 CA10-204ENST00000570565 2276 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RNU6-1020P-201ENST00000363684 107 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 Y_RNA.581-201ENST00000391017 97 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RNU6-817P-201ENST00000391083 104 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RPL31P2-201ENST00000413849 377 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RPL21P90-201ENST00000415692 466 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 CYP4F32P-201ENST00000426492 504 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AL357632.1-201ENST00000426688 643 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AL591043.1-201ENST00000432461 424 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AL390119.1-201ENST00000440329 312 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 TPT1P13-201ENST00000449760 499 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AL592043.2-201ENST00000454146 743 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RN7SL834P-201ENST00000461450 286 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RN7SL19P-201ENST00000462522 306 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC133134.1-201ENST00000466800 359 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC091021.1-201ENST00000468051 388 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RPS24P16-201ENST00000497294 392 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 GAPDHP44-201ENST00000513513 1007 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 Y_RNA.662-201ENST00000516028 97 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RNA5SP460-201ENST00000516789 100 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 SCARNA20.3-201ENST00000516913 131 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC100823.2-201ENST00000518337 699 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 CR383656.7-201ENST00000548164 174 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC004024.1-201ENST00000549244 247 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 TRAV32-201ENST00000553993 340 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AL359219.2-201ENST00000555184 348 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 RN7SL192P-201ENST00000584303 299 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC006329.2-201ENST00000611491 394 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AL031601.2-202ENST00000622650 282 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 SNORA43.5-201ENST00000631270 138 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 AC007993.1-201ENST00000621298 2430 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 OR2AH1P-202ENST00000641232 2744 ntBASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 MED6-212ENST00000615788 1700 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-1Q9BYR8 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms