Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC122134.1-201ENST00000565664 1104 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC090578.1-201ENST00000604955 591 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AL390208.1-201ENST00000605885 644 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC073569.3-201ENST00000619055 682 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC022509.4-201ENST00000621404 572 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC019278.1-201ENST00000623516 479 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC025048.6-202ENST00000627667 438 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 MIR3688-2-201ENST00000636963 87 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC093591.2-201ENST00000565254 3843 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 STX3-208ENST00000641815 3236 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 RNU6-31P-201ENST00000384388 108 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 RNU6-876P-201ENST00000391295 104 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 RPL23AP59-201ENST00000399415 461 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AL589647.1-201ENST00000402485 466 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC016769.2-201ENST00000414815 475 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 VN1R10P-201ENST00000447106 875 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 SSXP1-201ENST00000453640 473 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 DNAJC19P1-201ENST00000455312 319 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 RN7SL443P-201ENST00000464331 290 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 BX284632.1-201ENST00000478218 541 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 RN7SL244P-201ENST00000493405 297 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 RPS27AP18-201ENST00000515536 459 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 EIF4A2P5-201ENST00000529914 499 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 NMNAT1P1-201ENST00000554095 876 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 ZNF519P2-201ENST00000557032 169 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AP004372.1-201ENST00000604842 844 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC093799.2-201ENST00000610062 578 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC090229.1-201ENST00000590983 1609 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AP005901.5-201ENST00000545779 1796 ntBASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP1Q96SZ6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC005005.4-201ENST00000623789 16698 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 TEX21P-201ENST00000447107 1476 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 CASC19-206ENST00000641028 1430 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 RNU6-660P-201ENST00000364566 109 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AL356057.2-201ENST00000403318 432 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 NRBF2P2-201ENST00000413087 861 ntBASIC5.35□□□□□ -1.55
CDK5RAP1Q96SZ6 AC098592.2-201ENST00000413158 265 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms