Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AC109445.1-201ENST00000512356 383 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 RNU6-488P-201ENST00000515918 99 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 RNU6-202P-201ENST00000515998 96 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AP000926.4-201ENST00000527351 454 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 DUXAP6-201ENST00000553858 601 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AL353778.1-201ENST00000603149 408 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AC009220.3-201ENST00000604318 586 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 MIR6853-201ENST00000619642 74 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 CU459211.1-201ENST00000635667 749 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 AC120338.1-201ENST00000625074 1541 ntBASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CHMP4CQ96CF2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 RPL31P52-201ENST00000407532 367 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 RNA5SP80-201ENST00000410475 111 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 VDAC1P9-201ENST00000412766 841 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC004690.1-201ENST00000418216 328 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 LINC00993-201ENST00000420453 540 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 E2F6P2-201ENST00000420708 748 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 FABP7P1-201ENST00000424004 391 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC012519.1-201ENST00000424588 610 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 RPL7P44-201ENST00000424827 742 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AL353597.2-202ENST00000434901 373 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 NDUFA5P7-201ENST00000452914 242 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 ATG12P2-201ENST00000456830 416 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 WBP1LP4-201ENST00000505043 344 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC091868.1-201ENST00000508746 304 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC118465.1-201ENST00000513820 1271 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 RNU1-6P-201ENST00000516290 144 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 RNU6-1225P-201ENST00000516336 65 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 MTND2P26-201ENST00000528255 1029 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 OR5M2P-201ENST00000529003 936 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AP006289.1-201ENST00000538089 277 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AL132657.2-201ENST00000564417 358 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC079171.1-201ENST00000568788 914 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC091042.1-201ENST00000579213 173 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC022069.1-201ENST00000582910 658 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 ELOCP28-201ENST00000590044 317 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC008687.2-201ENST00000597865 520 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AL354760.1-201ENST00000608357 643 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC069209.1-201ENST00000619282 651 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC022079.1-201ENST00000621546 602 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC078883.4-201ENST00000623218 367 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AL512506.2-201ENST00000624472 458 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AP003072.4-201ENST00000624580 310 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 AC109315.1-201ENST00000584143 1347 ntBASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CHMP4CQ96CF2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 AL445487.1-201ENST00000415694 1580 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 RNA5SP87-201ENST00000384155 118 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 SNORD116-23-201ENST00000384645 92 ntBASIC5.65□□□□□ -1.5
CHMP4CQ96CF2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms