Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPL37P6-202ENST00000464216 403 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC068305.1-201ENST00000497406 726 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC010376.1-201ENST00000522101 334 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC118942.1-201ENST00000529674 1035 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 EIF5A2P1-201ENST00000564027 460 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 MIR3667-201ENST00000581025 74 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 AP001180.3-201ENST00000582221 145 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 AL606834.3-201ENST00000602615 496 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC034229.4-201ENST00000607861 441 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 AL391834.2-201ENST00000609982 546 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 AL713922.2-201ENST00000619384 716 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC009269.6-201ENST00000621778 588 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 AC135352.1-201ENST00000506173 1418 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 NXPH1-205ENST00000602349 1953 ntBASIC3.92□□□□□ -1.78
RFT1Q96AA3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFT1Q96AA3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.92□□□□□ -1.78
RFT1Q96AA3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFT1Q96AA3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFT1Q96AA3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFT1Q96AA3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFT1Q96AA3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 LINC02471-203ENST00000641941 4752 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFT1Q96AA3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFT1Q96AA3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFT1Q96AA3 RNA5SP388-201ENST00000362584 119 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 U3.15-201ENST00000365398 212 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RFT1Q96AA3 RNU6-298P-201ENST00000390888 96 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 DSTNP4-201ENST00000399472 474 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 GLULP6-201ENST00000399502 913 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 Z98745.1-201ENST00000402553 494 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 SFR1P1-201ENST00000403720 688 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 RNU6-575P-201ENST00000411326 105 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 BX510359.3-201ENST00000422168 306 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 RPS12P10-201ENST00000427031 377 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 MTCYBP32-201ENST00000427945 1084 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 UBE2V1P1-201ENST00000430836 445 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC087385.1-201ENST00000475062 312 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 RPL7P16-201ENST00000479738 738 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC119751.4-201ENST00000507498 357 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC008837.1-201ENST00000511513 412 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 RNU6-1028P-201ENST00000517164 93 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC105129.1-201ENST00000560250 297 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC090510.2-201ENST00000617465 629 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 MIR6853-201ENST00000619642 74 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 AC023510.2-201ENST00000622162 746 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 U3.53-201ENST00000628922 216 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 FAM157B-203ENST00000639350 358 ntBASIC3.91□□□□□ -1.78
RFT1Q96AA3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RFT1Q96AA3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RFT1Q96AA3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RFT1Q96AA3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.9□□□□□ -1.78
RFT1Q96AA3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms