Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST2H3AQ71DI3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST2H3AQ71DI3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST2H3AQ71DI3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HIST2H3AQ71DI3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 CR381670.1-201ENST00000624291 1693 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 ASNSP1-204ENST00000641977 1664 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 RNA5SP283-201ENST00000365604 119 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 MIR320B1-201ENST00000390209 79 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 HSPE1P8-201ENST00000406997 288 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 SNORA3.3-201ENST00000408712 125 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 YY1P1-201ENST00000427625 668 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 RNU7-170P-201ENST00000459303 61 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 AC023050.1-201ENST00000498198 304 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 MTCO1P35-201ENST00000515270 228 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 Vault.1-201ENST00000516474 102 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 RNU6-352P-201ENST00000516908 107 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 PDCL2P2-201ENST00000533651 189 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 PARP1P2-201ENST00000556806 195 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 AC099489.2-201ENST00000574976 260 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 AL606490.9-201ENST00000603331 271 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 BRDTP1-201ENST00000605735 677 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 AL354760.1-201ENST00000608357 643 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 AL589935.2-201ENST00000616471 1231 ntBASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST2H3AQ71DI3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 Y_RNA.625-201ENST00000411256 107 ntBASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AC245517.2-201ENST00000442890 346 ntBASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AC010460.1-201ENST00000507087 466 ntBASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 RNU4-18P-201ENST00000516751 149 ntBASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 CYCSP30-201ENST00000546447 172 ntBASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AC006960.3-201ENST00000561845 705 ntBASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AC022884.3-201ENST00000579571 248 ntBASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AC067852.4-201ENST00000590314 478 ntBASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 AP003072.4-201ENST00000624580 310 ntBASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HIST2H3AQ71DI3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 PWAR6-201ENST00000552334 4618 ntBASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 DCAF13P3-201ENST00000561147 1334 ntBASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 AL118496.1-201ENST00000440201 1812 ntBASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 RNU6-1251P-201ENST00000364502 107 ntBASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 RNA5SP424-201ENST00000390988 115 ntBASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST2H3AQ71DI3 MTCO3P31-201ENST00000405526 789 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms