Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SWSAP1Q6NVH7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SWSAP1Q6NVH7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.26□□□□□ -1.57
SWSAP1Q6NVH7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SWSAP1Q6NVH7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
SWSAP1Q6NVH7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SWSAP1Q6NVH7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SWSAP1Q6NVH7 AC109315.1-201ENST00000584143 1347 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 RNU6-582P-201ENST00000362989 107 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 SNORD116-23-201ENST00000384645 92 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 MIR141-201ENST00000384975 95 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 RPS3AP23-201ENST00000401762 784 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 ARL4AP5-201ENST00000404372 599 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AL365338.1-201ENST00000422282 858 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AL365203.2-201ENST00000423444 196 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 CENPIP1-201ENST00000425713 902 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 DNAJC19P7-201ENST00000428811 344 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AL513175.1-201ENST00000431492 780 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 RPL37P1-201ENST00000432310 284 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AL050321.1-201ENST00000432363 400 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC004938.1-201ENST00000438468 308 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC241584.1-201ENST00000438469 1241 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 ARL2BPP10-201ENST00000446487 531 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 EEF1A1P1-201ENST00000447052 739 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 MTCO3P11-201ENST00000455103 774 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AL109741.2-201ENST00000455561 343 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 snoU13.1-201ENST00000459157 104 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC010683.1-201ENST00000473673 378 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AK3P4-201ENST00000504283 583 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 RNA5SP249-201ENST00000516127 99 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 RNU6-885P-201ENST00000516607 104 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC105129.1-201ENST00000560250 297 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AL353778.1-201ENST00000603149 408 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 DUXAP11-201ENST00000603858 526 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC243756.2-201ENST00000618406 463 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 BMS1P21-201ENST00000634565 365 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AF001550.2-201ENST00000636643 217 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 MIR3974-201ENST00000637126 96 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 AC103706.2-201ENST00000638080 240 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 MKKS-204ENST00000639674 192 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 SGO1P2-201ENST00000429458 1589 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 ZFRP1-201ENST00000457579 2970 ntBASIC5.25□□□□□ -1.57
SWSAP1Q6NVH7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 RNU6-492P-201ENST00000363035 104 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 Y_RNA.169-201ENST00000363745 96 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 Y_RNA.311-201ENST00000365068 96 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 PRRC2CP1-201ENST00000404428 159 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 AC016397.1-201ENST00000412463 242 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 EIF4HP2-201ENST00000424380 563 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 SKP1P3-201ENST00000429280 487 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 TXNL1P1-201ENST00000429528 554 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 UBE2D3P1-201ENST00000436669 444 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 RPL23AP15-201ENST00000450202 459 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 AL133217.1-201ENST00000450980 425 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 NDUFA5P9-201ENST00000472609 340 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 NIP7P2-201ENST00000485801 544 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 LINC00888-204ENST00000487386 421 ntBASIC5.24□□□□□ -1.57
SWSAP1Q6NVH7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms