Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC090615.1-201ENST00000577519 154 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 MIR4330-201ENST00000579077 105 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC011477.5-201ENST00000586571 259 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC022893.3-201ENST00000607665 437 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC092807.2-201ENST00000609367 243 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC133104.2-201ENST00000615272 193 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 DHX40P1-201ENST00000588725 1412 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC244517.1-201ENST00000606030 2086 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 WBP11P1-201ENST00000562560 1931 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 RNU1-134P-201ENST00000362935 165 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 RNU6-1252P-201ENST00000363054 104 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 Y_RNA.112-201ENST00000363250 102 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 Y_RNA.234-201ENST00000364409 97 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 SNORA70.3-201ENST00000365075 132 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 RPS12P24-201ENST00000412619 387 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 RPSAP35-201ENST00000413753 818 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC068533.1-201ENST00000418542 415 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 RPL7L1P10-201ENST00000427790 463 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 MTATP6P16-201ENST00000434543 526 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 OR7E116P-201ENST00000448529 957 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC002553.3-201ENST00000453002 341 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 MTATP8P1-201ENST00000467115 207 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 RN7SL643P-201ENST00000471845 291 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC116562.3-201ENST00000506136 177 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 SNORA70.20-201ENST00000516848 126 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 RNA5SP503-201ENST00000517047 117 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC068587.5-201ENST00000528506 175 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AP005435.4-201ENST00000529514 284 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 UBE2L4-201ENST00000587688 464 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 RPL23AP92-201ENST00000603609 255 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AP001823.1-201ENST00000604056 1003 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC113194.1-201ENST00000606037 500 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AL022394.1-201ENST00000606979 292 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 MAPK10-270ENST00000641102 3538 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7□□□□□ -1.29
PRPF38BQ5VTL8 MTND5P19-201ENST00000424872 1794 ntBASIC7□□□□□ -1.29
PRPF38BQ5VTL8 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PRPF38BQ5VTL8 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.99□□□□□ -1.29
PRPF38BQ5VTL8 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.99□□□□□ -1.29
PRPF38BQ5VTL8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.99□□□□□ -1.29
PRPF38BQ5VTL8 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
PRPF38BQ5VTL8 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
PRPF38BQ5VTL8 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PRPF38BQ5VTL8 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
PRPF38BQ5VTL8 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms