Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL121834.1-202ENST00000404494 277 ntBASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 JKAMPP1-201ENST00000413804 919 ntBASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 RPL23AP69-201ENST00000431134 458 ntBASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 AC025750.2-201ENST00000442609 450 ntBASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 AC037198.2-201ENST00000478845 733 ntBASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 TMED11P-201ENST00000479478 690 ntBASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.16□□□□□ -1.58
CDC42BPAQ5VT25 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDC42BPAQ5VT25 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDC42BPAQ5VT25 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
CDC42BPAQ5VT25 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.15□□□□□ -1.58
CDC42BPAQ5VT25 S100A11P2-201ENST00000467589 312 ntBASIC5.15□□□□□ -1.58
CDC42BPAQ5VT25 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.15□□□□□ -1.58
CDC42BPAQ5VT25 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.15□□□□□ -1.58
CDC42BPAQ5VT25 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.15□□□□□ -1.58
CDC42BPAQ5VT25 AC015802.5-201ENST00000607478 399 ntBASIC5.15□□□□□ -1.58
CDC42BPAQ5VT25 RNVU1-4-201ENST00000612985 164 ntBASIC5.15□□□□□ -1.58
CDC42BPAQ5VT25 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDC42BPAQ5VT25 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDC42BPAQ5VT25 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 HMGN1P24-201ENST00000412282 298 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 MTND4P22-201ENST00000413116 1169 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 ATP5C1P1-201ENST00000441945 895 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 AP001992.1-205ENST00000462248 379 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 RPS3AP50-201ENST00000487064 803 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 AC096576.1-201ENST00000489014 359 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 ATP5A1P2-202ENST00000616464 443 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 AC022882.1-201ENST00000532142 501 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 AL121766.1-201ENST00000547436 487 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 AC010680.3-201ENST00000604215 520 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 AC006386.2-201ENST00000624491 75 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 AC012005.1-201ENST00000624575 75 ntBASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.14□□□□□ -1.59
CDC42BPAQ5VT25 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 RN7SL863P-201ENST00000462370 296 ntBASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 AC023598.1-201ENST00000472521 361 ntBASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 AC004069.2-201ENST00000505438 1114 ntBASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 DUXAP6-201ENST00000553858 601 ntBASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 AC103968.1-201ENST00000557841 573 ntBASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDC42BPAQ5VT25 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 FAM35BP-202ENST00000497389 3337 ntBASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 RNU1-140P-201ENST00000365040 165 ntBASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 AC074367.1-201ENST00000438685 1125 ntBASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 AL831737.1-201ENST00000441288 271 ntBASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 AC020893.1-201ENST00000502452 580 ntBASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 AC023141.12-201ENST00000512399 199 ntBASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 AL162274.2-201ENST00000614406 332 ntBASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 AC074276.2-201ENST00000619891 348 ntBASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 AC079298.2-201ENST00000623885 459 ntBASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDC42BPAQ5VT25 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 SNORA44-201ENST00000384584 132 ntBASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 NANOGP6-201ENST00000429190 847 ntBASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 RPL27AP5-201ENST00000469428 449 ntBASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 RPL5P16-201ENST00000471467 790 ntBASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 AP000926.4-201ENST00000527351 454 ntBASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 HIGD1AP1-201ENST00000550979 275 ntBASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 AL390334.1-201ENST00000556395 450 ntBASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 AC233280.2-201ENST00000603917 1070 ntBASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.11□□□□□ -1.59
CDC42BPAQ5VT25 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms