Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PRPS1P1-201ENST00000445305 876 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 RPL12P30-201ENST00000488389 499 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 RPL19P11-201ENST00000495944 589 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 HMGB1P35-201ENST00000503360 598 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 Y_RNA.673-201ENST00000516306 88 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AC067852.5-201ENST00000589299 310 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 AL732372.2-225ENST00000642124 456 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 ZNF402P-201ENST00000404435 3100 ntBASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.91□□□□□ -1.3
CTC1Q2NKJ3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AL355377.1-201ENST00000621125 1653 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 Y_RNA.25-201ENST00000362528 102 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 RNU4-66P-201ENST00000365199 138 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 Y_RNA.496-201ENST00000384444 101 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 RNU6-125P-201ENST00000384505 107 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 BTBD10P2-201ENST00000404779 676 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 RNU6-101P-201ENST00000410323 104 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 RNU4-64P-201ENST00000410795 131 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 RNU6-954P-201ENST00000411355 107 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AL713922.1-201ENST00000416477 747 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 BOLA3P4-201ENST00000418151 400 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 EIF4EP1-201ENST00000422311 642 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AP001324.1-201ENST00000428553 399 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC094019.1-201ENST00000434678 472 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 OSTCP8-201ENST00000445117 448 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 HMGB1P15-201ENST00000453854 435 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 HLA-DPA3-207ENST00000454398 229 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 PSMC1P13-201ENST00000458195 985 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC006512.1-201ENST00000468816 291 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 UBFD1P1-201ENST00000473259 814 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC007998.1-201ENST00000474156 672 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 RN7SL273P-201ENST00000481561 299 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 TRBVA-201ENST00000498804 316 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC103843.2-201ENST00000530523 682 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC022080.3-201ENST00000544433 482 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC068831.4-201ENST00000556118 109 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 PLCE1P1-201ENST00000622094 305 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 AL669831.3-213ENST00000636676 183 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 LINC02495-203ENST00000636704 242 ntBASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTC1Q2NKJ3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 AC012213.2-201ENST00000562917 4597 ntBASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
CTC1Q2NKJ3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms