Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC008958.1-201ENST00000511047 682 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AC108043.1-201ENST00000512696 574 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDK3Q00526 AC023632.1-201ENST00000518463 375 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AC090151.1-201ENST00000520784 730 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AF279873.1-201ENST00000523393 313 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.28□□□□□ -1.72
CDK3Q00526 CYCSP29-201ENST00000533731 318 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.28□□□□□ -1.72
CDK3Q00526 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 AC004217.3-201ENST00000551552 878 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 AL352979.3-201ENST00000553515 247 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 AL020997.3-201ENST00000602843 359 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AL445435.1-201ENST00000604232 665 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 RNU4-5P-201ENST00000607255 135 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AC034229.4-201ENST00000607861 441 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.28□□□□□ -1.72
CDK3Q00526 AL731566.2-201ENST00000618971 317 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AC007546.1-201ENST00000619452 559 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDK3Q00526 AC140113.4-201ENST00000622087 222 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.28□□□□□ -1.72
CDK3Q00526 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDK3Q00526 AC027290.2-201ENST00000623210 18662 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDK3Q00526 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDK3Q00526 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK3Q00526 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CDK3Q00526 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CDK3Q00526 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDK3Q00526 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK3Q00526 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK3Q00526 AC016716.1-201ENST00000265882 708 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AP000568.1-201ENST00000282964 442 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 MIR383-201ENST00000362257 73 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 RNU1-87P-201ENST00000363727 170 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 RN7SKP224-201ENST00000364140 325 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 BMS1P3-201ENST00000372011 932 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 GSTA8P-201ENST00000404253 637 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 PRRC2CP1-201ENST00000404428 159 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 HNRNPDP2-201ENST00000406475 478 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK3Q00526 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.27□□□□□ -1.73
CDK3Q00526 MFSD13B-201ENST00000420133 1290 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 NANOGP5-201ENST00000424456 877 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AL157831.1-201ENST00000426134 473 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK3Q00526 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.27□□□□□ -1.73
CDK3Q00526 OR10R1P-201ENST00000441524 1141 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 HMGB1P48-201ENST00000446155 598 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK3Q00526 RPL23AP15-201ENST00000450202 459 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK3Q00526 AC022795.1-201ENST00000473808 480 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AC090013.1-201ENST00000485147 480 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 UBA52P3-201ENST00000491303 382 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK3Q00526 RNA5SP49-201ENST00000516450 115 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 MTND2P32-201ENST00000521584 1038 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AP003730.1-201ENST00000524605 285 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
CDK3Q00526 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK3Q00526 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK3Q00526 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.27□□□□□ -1.73
CDK3Q00526 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.27□□□□□ -1.73
CDK3Q00526 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK3Q00526 ATP5J2P6-201ENST00000565203 266 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.27□□□□□ -1.73
CDK3Q00526 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.27□□□□□ -1.73
CDK3Q00526 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.27□□□□□ -1.73
CDK3Q00526 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK3Q00526 AP004247.3-201ENST00000608682 624 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AL355816.2-201ENST00000610049 647 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AC243756.2-201ENST00000618406 463 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.27□□□□□ -1.73
CDK3Q00526 AL445363.3-201ENST00000623080 671 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 AL078595.3-201ENST00000623815 1166 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.27□□□□□ -1.73
CDK3Q00526 ZNF663P-202ENST00000641770 1131 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.27□□□□□ -1.73
CDK3Q00526 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
CDK3Q00526 AC005261.4-201ENST00000600047 1385 ntBASIC4.27□□□□□ -1.73
CDK3Q00526 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK3Q00526 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK3Q00526 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK3Q00526 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK3Q00526 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CDK3Q00526 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.26□□□□□ -1.73
CDK3Q00526 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CDK3Q00526 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDK3Q00526 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDK3Q00526 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDK3Q00526 RNA5SP391-201ENST00000363456 119 ntBASIC4.26□□□□□ -1.73
CDK3Q00526 SNORD116-12-201ENST00000384468 92 ntBASIC4.26□□□□□ -1.73
CDK3Q00526 FABP12P1-201ENST00000401911 322 ntBASIC4.26□□□□□ -1.73
CDK3Q00526 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms