Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP98P52948 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUP98P52948 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUP98P52948 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP98P52948 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
NUP98P52948 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP98P52948 NANOGNBP1-201ENST00000448444 480 ntBASIC4.23□□□□□ -1.73
NUP98P52948 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.23□□□□□ -1.73
NUP98P52948 AC073522.1-201ENST00000483312 377 ntBASIC4.23□□□□□ -1.73
NUP98P52948 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.23□□□□□ -1.73
NUP98P52948 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP98P52948 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
NUP98P52948 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP98P52948 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUP98P52948 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.23□□□□□ -1.73
NUP98P52948 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NUP98P52948 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP98P52948 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP98P52948 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP98P52948 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP98P52948 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.22□□□□□ -1.73
NUP98P52948 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.22□□□□□ -1.73
NUP98P52948 REREP1Y-201ENST00000422655 198 ntBASIC4.22□□□□□ -1.73
NUP98P52948 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.22□□□□□ -1.73
NUP98P52948 AJ239321.1-201ENST00000424255 564 ntBASIC4.22□□□□□ -1.73
NUP98P52948 AC006989.1-201ENST00000427212 131 ntBASIC4.22□□□□□ -1.73
NUP98P52948 RPL23AP69-201ENST00000431134 458 ntBASIC4.22□□□□□ -1.73
NUP98P52948 OR6C71P-201ENST00000432580 913 ntBASIC4.22□□□□□ -1.73
NUP98P52948 REREP2Y-201ENST00000439103 200 ntBASIC4.22□□□□□ -1.73
NUP98P52948 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUP98P52948 AC023598.1-201ENST00000472521 361 ntBASIC4.22□□□□□ -1.73
NUP98P52948 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.22□□□□□ -1.73
NUP98P52948 AP000889.1-201ENST00000530968 660 ntBASIC4.22□□□□□ -1.73
NUP98P52948 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.22□□□□□ -1.73
NUP98P52948 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP98P52948 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.22□□□□□ -1.73
NUP98P52948 AC006946.3-201ENST00000609791 756 ntBASIC4.22□□□□□ -1.73
NUP98P52948 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NUP98P52948 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NUP98P52948 AC083843.3-201ENST00000623679 2186 ntBASIC4.22□□□□□ -1.73
NUP98P52948 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.22□□□□□ -1.73
NUP98P52948 AC068647.1-201ENST00000489539 2265 ntBASIC4.22□□□□□ -1.73
NUP98P52948 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP98P52948 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NUP98P52948 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
NUP98P52948 SNORA38.1-201ENST00000364172 131 ntBASIC4.21□□□□□ -1.74
NUP98P52948 U3.19-201ENST00000390893 196 ntBASIC4.21□□□□□ -1.74
NUP98P52948 DPPA2P2-201ENST00000418220 897 ntBASIC4.21□□□□□ -1.74
NUP98P52948 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP98P52948 UBE2V1P1-201ENST00000430836 445 ntBASIC4.21□□□□□ -1.74
NUP98P52948 AL357552.1-201ENST00000445254 415 ntBASIC4.21□□□□□ -1.74
NUP98P52948 RN7SL93P-201ENST00000463035 293 ntBASIC4.21□□□□□ -1.74
NUP98P52948 NPM1P29-201ENST00000483112 803 ntBASIC4.21□□□□□ -1.74
NUP98P52948 AC012123.2-201ENST00000485809 248 ntBASIC4.21□□□□□ -1.74
NUP98P52948 RN7SL504P-201ENST00000494496 287 ntBASIC4.21□□□□□ -1.74
NUP98P52948 RNA5SP341-201ENST00000516261 117 ntBASIC4.21□□□□□ -1.74
NUP98P52948 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.21□□□□□ -1.74
NUP98P52948 AC018442.3-201ENST00000523025 183 ntBASIC4.21□□□□□ -1.74
NUP98P52948 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.21□□□□□ -1.74
NUP98P52948 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP98P52948 AC018555.1-201ENST00000567548 1980 ntBASIC4.21□□□□□ -1.74
NUP98P52948 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
NUP98P52948 AC083843.2-201ENST00000568248 6253 ntBASIC4.21□□□□□ -1.74
NUP98P52948 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP98P52948 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP98P52948 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
NUP98P52948 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUP98P52948 RNA5SP235-201ENST00000365411 114 ntBASIC4.21□□□□□ -1.74
NUP98P52948 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP98P52948 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP98P52948 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP98P52948 RPL37P3-201ENST00000456825 293 ntBASIC4.21□□□□□ -1.74
NUP98P52948 AC023141.12-201ENST00000512399 199 ntBASIC4.21□□□□□ -1.74
NUP98P52948 APOOP4-201ENST00000513530 597 ntBASIC4.21□□□□□ -1.74
NUP98P52948 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP98P52948 Vault.1-201ENST00000516474 102 ntBASIC4.21□□□□□ -1.74
NUP98P52948 AL121594.4-201ENST00000556211 1196 ntBASIC4.21□□□□□ -1.74
NUP98P52948 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP98P52948 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP98P52948 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NUP98P52948 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.2□□□□□ -1.74
NUP98P52948 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP98P52948 RPL7P44-201ENST00000424827 742 ntBASIC4.2□□□□□ -1.74
NUP98P52948 ATP5C1P1-201ENST00000441945 895 ntBASIC4.2□□□□□ -1.74
NUP98P52948 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP98P52948 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP98P52948 RN7SL863P-201ENST00000462370 296 ntBASIC4.2□□□□□ -1.74
NUP98P52948 S100A11P2-201ENST00000467589 312 ntBASIC4.2□□□□□ -1.74
NUP98P52948 RPL7P23-201ENST00000493874 747 ntBASIC4.2□□□□□ -1.74
NUP98P52948 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP98P52948 AC021678.1-201ENST00000505195 936 ntBASIC4.2□□□□□ -1.74
NUP98P52948 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms