Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMARCA2P51531 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SMARCA2P51531 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.24□□□□□ -1.41
SMARCA2P51531 AC011266.1-201ENST00000624119 3569 ntBASIC6.24□□□□□ -1.41
SMARCA2P51531 OR51C1P-202ENST00000641159 1444 ntBASIC6.24□□□□□ -1.41
SMARCA2P51531 AL022322.2-201ENST00000624072 20397 ntBASIC6.24□□□□□ -1.41
SMARCA2P51531 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA2P51531 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA2P51531 FRG1CP-201ENST00000358464 769 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
SMARCA2P51531 SNORA44-201ENST00000384584 132 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 U3.39-201ENST00000408569 239 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 AC096638.2-201ENST00000434965 711 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 NPM1P48-201ENST00000436002 853 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.23□□□□□ -1.41
SMARCA2P51531 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.23□□□□□ -1.41
SMARCA2P51531 AC136601.2-201ENST00000604356 474 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA2P51531 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA2P51531 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA2P51531 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.23□□□□□ -1.41
SMARCA2P51531 ZNF90P1-201ENST00000480493 1951 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA2P51531 AL078595.2-201ENST00000605309 1780 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.23□□□□□ -1.41
SMARCA2P51531 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA2P51531 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA2P51531 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.23□□□□□ -1.41
SMARCA2P51531 PTP4A1P3-201ENST00000433661 420 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 RPS29P31-201ENST00000446147 164 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.23□□□□□ -1.41
SMARCA2P51531 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.23□□□□□ -1.41
SMARCA2P51531 AC004924.1-201ENST00000480160 781 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 AC113192.3-201ENST00000529152 742 ntBASIC6.23□□□□□ -1.41
SMARCA2P51531 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.23□□□□□ -1.41
SMARCA2P51531 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SMARCA2P51531 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA2P51531 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA2P51531 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA2P51531 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA2P51531 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC6.22□□□□□ -1.41
SMARCA2P51531 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA2P51531 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA2P51531 AL136131.1-201ENST00000406079 803 ntBASIC6.22□□□□□ -1.41
SMARCA2P51531 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.22□□□□□ -1.41
SMARCA2P51531 AL158071.1-201ENST00000430315 461 ntBASIC6.22□□□□□ -1.41
SMARCA2P51531 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.22□□□□□ -1.41
SMARCA2P51531 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC6.22□□□□□ -1.41
SMARCA2P51531 NPM1P29-201ENST00000483112 803 ntBASIC6.22□□□□□ -1.41
SMARCA2P51531 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA2P51531 AC092747.2-201ENST00000545069 983 ntBASIC6.22□□□□□ -1.41
SMARCA2P51531 BMS1P21-201ENST00000634565 365 ntBASIC6.22□□□□□ -1.41
SMARCA2P51531 AC027290.2-201ENST00000623210 18662 ntBASIC6.21□□□□□ -1.41
SMARCA2P51531 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SMARCA2P51531 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC6.21□□□□□ -1.41
SMARCA2P51531 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
SMARCA2P51531 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.21□□□□□ -1.42
SMARCA2P51531 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SMARCA2P51531 RNA5SP197-201ENST00000363357 119 ntBASIC6.21□□□□□ -1.42
SMARCA2P51531 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.21□□□□□ -1.42
SMARCA2P51531 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.21□□□□□ -1.42
SMARCA2P51531 AC138409.2-202ENST00000507274 458 ntBASIC6.21□□□□□ -1.42
SMARCA2P51531 AC004024.1-201ENST00000549244 247 ntBASIC6.21□□□□□ -1.42
SMARCA2P51531 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.21□□□□□ -1.42
SMARCA2P51531 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SMARCA2P51531 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.2□□□□□ -1.42
SMARCA2P51531 TCP11X3P-202ENST00000514289 1254 ntBASIC6.2□□□□□ -1.42
SMARCA2P51531 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.2□□□□□ -1.42
SMARCA2P51531 RPL12P50-201ENST00000603116 116 ntBASIC6.2□□□□□ -1.42
SMARCA2P51531 MIR7106-201ENST00000612419 65 ntBASIC6.2□□□□□ -1.42
SMARCA2P51531 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.2□□□□□ -1.42
SMARCA2P51531 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SMARCA2P51531 AL645937.1-201ENST00000641739 1652 ntBASIC6.2□□□□□ -1.42
SMARCA2P51531 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
SMARCA2P51531 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SMARCA2P51531 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SMARCA2P51531 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SMARCA2P51531 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SMARCA2P51531 FTLP6-201ENST00000355274 422 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 MIR449A-201ENST00000362113 91 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMARCA2P51531 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMARCA2P51531 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.19□□□□□ -1.42
SMARCA2P51531 SAGE2P-201ENST00000420011 2126 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 RN7SL594P-201ENST00000470590 287 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 RPL12P22-201ENST00000519073 490 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.19□□□□□ -1.42
SMARCA2P51531 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.19□□□□□ -1.42
SMARCA2P51531 AC009464.1-201ENST00000615731 469 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 AL669942.2-201ENST00000620352 697 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 AC091905.1-201ENST00000624400 311 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 AL596275.2-204ENST00000641628 552 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 AC138627.1-204ENST00000641894 765 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 AL596275.2-206ENST00000641957 626 ntBASIC6.19□□□□□ -1.42
SMARCA2P51531 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SMARCA2P51531 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMARCA2P51531 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMARCA2P51531 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMARCA2P51531 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms